Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4594 |
Symbol | |
ID | 6113575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5071167 |
End bp | 5076068 |
Gene Length | 4902 bp |
Protein Length | 1633 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641624400 |
Product | alpha-2-macroglobulin domain-containing protein |
Protein accession | YP_001751443 |
Protein GI | 170723755 |
COG category | [R] General function prediction only |
COG ID | [COG2373] Large extracellular alpha-helical protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.144711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAACA AAGGATTGTT GCTGGCCTGC GCGCTGGCCC TGCTCAGTGC CTGTGATTCC TCCACGCCAG ACACACCTGC CGCCACCGAA AAAACGGCGG CAAGCACCCC GGCCGAATCT GCGGCGCCCA AGCGCGAGGA CTCTGCCGAA CTCGCCAAAC GCTACGAAGG CCGTGAGCTC AGCGTACTGG ATGTCTCGGA AGTGCAGCTC GACGGCGCCA GTGCCCTCTC GGTCAGTTTT TCCGCACCGC TGGACGCAAA GCAGGACTTC GCTGCCAAGC TCCATCTGGT CGATACCGTC AAAGGCAAGG TCGACGGTGC CTGGGAGCTT GCCGACAACC AGATGGAACT GCGCCTGCGT CACCTCGAGC CGCAGCGCAA ACTTGTGCTG ACCGTCGATA AGGGTCTGCT GGCTGTCAAC GGCAAGCAGC TGGAAAGCGA GTCGGTGACC CGCCTGGAAA CCCGCGACAT GCAGCCGACC ATCGGCTTCG CCAGCCGGGG CTCACTGCTG CCTACGCGGC TGGCCGAGGG CCTGCCGGTG ATTGCCCTGA ACGTCGACAA GGTCGATGTC GAGTTTTTCC GGGTCAAGCC GGACATGCTC TCGACCTTCC TGGTCAACTG GGGCCGCAAC AGCAGCCTCT ACTACTACCA GTCCAAGGAA ACCTTGGCCC TGGCCGACCT GGTCTACAGC GGCCGTTTCG ACCTCAACCC GGCGCGCAAT ACCCGTGAGA CCGTGTTGCT GCCGATCGCC GGGATCAAGC CGCTGCAGGA GCCGGGCGTA TACCTGGCAG TGATGCGCGC TTCAGGGACC TACGATTATT CGCAGCCGGC GACGCTGTTC ACACTCAGCG ATATCGGTGT ATCGGCCCAC CGCTATCGCG ACCGCCTTGA CGTGTTCTCC CAAGCCCTGG AGGGTGGCAA GGCGCTCAAG GAGGTAAACC TCGAACTGCA TGACGACAAG GGCAAGCTGC TGGCCCAGGC CAAGACCGAT GGCCAAGGCC ATGCTCAGCT GCCGCTCACG GCCAAGGCCG ATACCCTGAT CGCAACCCAG GGTGTGCATA CCACACTGCT ACGCCTGAAC ACTGCAGCGC TGGACCTGGC AGAATTCGAT ATCACCGGCC CGCAGGCAAA TCCGCTGCAG CTCTTCATCT TTGGCCCGCG CGACCTGTAT CGCCCGGGTG AGACGGTGCT GCTCAACGGC CTGTTGCGCG ACCAGGATGG CAAGCCGGTA AAGGCCCAGC CGGTCACTGT GGAGGTGCGT CGCCCGGATG AGCAGGTCAG CCGCAAGTTT GTCTGGGAAG CCGATGGCAG CGGCCTTTAT CAATACCAGC TGCAACTGGC TACAGAAGCG CCGACCGGTC GTTGGCAACT GCTGCTCGAC CTTGGAGGGG GGCGCAAGCA GGTCTATGAA TTCCTCGTTG AAGACTTTCT TCCTGAGCGC CTGGCGCTGG AACTCAAGGG CAGCAGCACA CCGCTCTCGC CCGAAGAAAC GGCGCAGGTC CAGGTCAATG GCCGTTACCT CTACGGCGCG CCGGCGGCGG GCAATCGCCT GAGCGGCCAG GCGTACGTGC GCCCCCTGCG CGAAGCGGTG CCAGCTTTAC CGGGTTACCA GTTCGGTTCG GTCACCGAGA CCGAGCTGAA CCAAGACCTG GAGCTGGATG AAGTGACCCT CGATCAGGCG GGCAAGGCAG TGGTCGATAT CGAAAGCCGC TGGGCCGAAG CGCGCTCGCC GCTGCAGTTG ACCGTGCAGG CCAGCTTGCA GGAGTCCGGT GGTCGACCGA TCACCCGTCG TCTCGAACAA CCGATCTGGC CCGCTGAGCG CCTGCCTGGC CTGCGTGGCA TGTTCGAGGG CGAAGAAACC GACAGCGACG GCCCGGTGGA ATTCGAGTTC CTGGTGGCCG ACCGTGACGG CAATAAGCTC GCTGCCAGCG ACCTCAAGGT ACGGCTGATC CGAGAACGCC GCGATTACTA CTGGAACTAC TCGCAAAGCG ACGGCTGGAG CTACAACTAC AACGAAAAAT TCCTCACTCA GAACGAGGAA AGCGTCAATG TAAAAGCGGG CTCTACTGCC AAGCTGACCT TCCAGGTCGA GTGGGGCCCT TACCGCGTCG AGGTGGAAGA CCCACAGACT GGCCTGGTGT CCAGCGAACG CTTCTGGGCG GGGTATCGCG CCCAGGACAA TGCCGAAGGC GGCGCAGTGC GCCCCGACCA GGTCAAGCTG GCGCTGGACC AGCCGGCTTA CGCTGATGGC GCTACTGCCA AGGTCACGGT AACCCCGCCA GCTGCCGGCA ATGGCTACCT GATGATCGAA TCCAGCGATG GCCCGCTGTG GTGGCAGGAA ATCGACGTCC CCGCCGAAGG CAAGACCTTC GATGTGCAAC TGGACAAGCA GTGGGCTCGC CACGACCTGT ACATCAGTGC CTTGGTGATC CGCCCGGGTG AGCGCAAGGC CAATGCCACG CCCAAGCGTG CCGTCGGTGT GCTACACCTG CCGCTCGGCC GCGCCGAGCG CAAACTGGCG GTCAGCCTGC AGGCACCGGA AAAAATGCGC CCCAAGCAAC CCCTGACGGT CAGAATCAAG GCCACCAATG CCGATGGCAG TATTCCCAAA CAGGCCCATG TGCTGTTGTC TGCTGTGGAT GTGGGCATCC TCAACATCAC CGACTTCAAG ACCCCTGACC CATACGCCAG CCTGTTCGGC CGCAAGGCCT ATGGCGTTGA TCAGCTGGAC ATCTATGGCC AACTGATCGA AGCCGGTCAG GGGCGCCTGG CCAGCCTGGC CTTCGGCGGT GACGCAGCCA TGGCCAAGGG GGGCAAACGC CCCAACACCA CGGTCACCAT CGTTGCCCGG CAGAGTGTGC CGGTGACCCT GAACGAGCAG GGCGAAGGCG AGGCGAGCGT CGATATTCCC GACTTCAATG GCGAACTGCG GCTGATGGCC CAGGCCTGGA CCGAGGACCA CTTCGGCATG GCCGAGGGCA AGACCGTGGT GGCGGCCCCG CTGATTGCCG AACTCTCAGC GCCACGCTTC CTCGCCGGTG GCGACCGTAC CAGCCTGGCG CTGGACCTGG CCAACCTTTC CGGCCTGGCC CAGCAGCTGA CTGTCGATAT CAGCACCGAA GGGCAGGTGA GCCTGGCAAC GAGCACTCAA CAACGTATTG CCCTGGCCGA GGGCCAGCGC ACCACTCTGA TGATCCCGGT GCAGGCGCAG GGTGGCTTGG GCCAGGGCAA GGTGCATGTG CGGGTCAATG GCCTGCAGTT GCCAGGCGAG CCGCAAAACA TCTTTGAACG TGAATGGACG CTGGGCGTAC GCCCGGCGTA CCCGGCCGTG CTCAAGCATT ACCGCGTGGC CCTCAAGGAC CAGCCCTGGA CGCTGCCTGA AGCCGACCTG GCAGCATTCG AACCTGCCGG GCTGGAAGCC AGCCTGGCGT TGTCGAGCCG CCCGCCACTG AACCTGGCCG AGCAGATCCG TGCCCTCGAA GCCTACCCCT ACGGTTGCCT GGAGCAGACC ACCAGCGGCC TGTACCCTTC GCTGTACGCC GATGCGCAGA GCCTCAAGCG CCTGGGGATC AAGGGAGAGC CGGCCGAGGT GCGCAAGCGC AAGATCGAAA TGGGCATCGA ACACTTGCTG GGGATGCAGC GCTACAACGG CAGTTTCGGC CTGTGGAGTT CGGACAGCGA GGAGGAGTAC TGGCTGACCG CCTATGTCAC CGACTTCCTG CTCAGGGCCC GTGACCAAGG CTACGGTGTG CCGGCCGACG CGCTGAAGAA AGCCAATGAA CGCCTGTTGC GCTACTTGCA GGAGCGTAAC CTGATTGAGG TCGACTACAG CGAGAACGCC GAACACACCC GCTTAGCCGT GCAGGCCTAT GCCGCGCTGG TGCTTTCGCG CAGCCAGCAG GCTCCGCTGG GTGCCTTGCG CAGCCTGTTC GAACGGCGCG CCGATGCGCG CTCCGGCCTG CCGCTGGTGC AACTGGCGGT GGCGCTGGAC AAGATGGGCG ACAAGCCGCG TTCGCAAGAG GCATTGCAAG CAGGCCTGGG TATCAGCCGC AGCAAAGGCT GGATGGCCGA TTACGGCAGC AGCCTGCGTG ACCAGGCACT GATCCTGGCG TTGCTGCAGG AGAGTGATCT GGCCAGTAAT CAGGTCGATC AGCGGTTGTT CGCGCTGTCT GATGAGCTGG CAGCCAACCG TTGGCTGTCG ACGCAGGAGC GCAATGCGCT GTACTTGGCC GGGCGTGGCT TGCTCGATAA GCCTGAGAGC CCGTGGAAGG CGCGCCTGGA CAGTGCCGGT GAGGTGCGGG AGTTCAGCAA TGGCGACGCT GGCATGAAGC TCGAAGGCCC ACTGTTGGCC TCGCCGCTGA GTGTGCAGAA CGAAGGTAGT GAAACTGTCT ACCAGCAACT GACCCTCTCG GGCTATCCAC GTCAGGCGCC TGCCGCGGGC GGCAACGGTA TGGAGATCCG CCGCGAATAC CTGGGCATGA ACGGCCAGGT ACTGGACCTG CACAACGTGC GCAGCGGCGA CCTGGTGCTG GTGCATCTGG CGCTCAAGGC CACGGACCGG GTTCCGGATG CGCTGGTGGT CGACCTGTTG CCGGCGGGCC TGGAGCTGGA GAACCAGAAC CTGGCGCAGA GCGCTGCCAG CCTGAACAAT GCCAGCAGCG CAGTGAAGCA GTGGCGTGAG TCGATGCAAA ACGCCAGCGT GGTGCATCAG GAATACCGTG ATGACCGGTA TGTGGCGGCG CTCAAGCTCG ACGGCTATGG CACCACTCAC CTGTTGTATC TGGCGCGAGC GGTGACCCCT GGCACCTACC GTATACCGCC GCCGCAAGTG GAGTCGATGT ACCGGCCGAA TCTGCAGGCG GTGGGCGATG GGCAGGGTGA GATGACGGTC AAATCAAGGT AG
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Protein sequence | MFNKGLLLAC ALALLSACDS STPDTPAATE KTAASTPAES AAPKREDSAE LAKRYEGREL SVLDVSEVQL DGASALSVSF SAPLDAKQDF AAKLHLVDTV KGKVDGAWEL ADNQMELRLR HLEPQRKLVL TVDKGLLAVN GKQLESESVT RLETRDMQPT IGFASRGSLL PTRLAEGLPV IALNVDKVDV EFFRVKPDML STFLVNWGRN SSLYYYQSKE TLALADLVYS GRFDLNPARN TRETVLLPIA GIKPLQEPGV YLAVMRASGT YDYSQPATLF TLSDIGVSAH RYRDRLDVFS QALEGGKALK EVNLELHDDK GKLLAQAKTD GQGHAQLPLT AKADTLIATQ GVHTTLLRLN TAALDLAEFD ITGPQANPLQ LFIFGPRDLY RPGETVLLNG LLRDQDGKPV KAQPVTVEVR RPDEQVSRKF VWEADGSGLY QYQLQLATEA PTGRWQLLLD LGGGRKQVYE FLVEDFLPER LALELKGSST PLSPEETAQV QVNGRYLYGA PAAGNRLSGQ AYVRPLREAV PALPGYQFGS VTETELNQDL ELDEVTLDQA GKAVVDIESR WAEARSPLQL TVQASLQESG GRPITRRLEQ PIWPAERLPG LRGMFEGEET DSDGPVEFEF LVADRDGNKL AASDLKVRLI RERRDYYWNY SQSDGWSYNY NEKFLTQNEE SVNVKAGSTA KLTFQVEWGP YRVEVEDPQT GLVSSERFWA GYRAQDNAEG GAVRPDQVKL ALDQPAYADG ATAKVTVTPP AAGNGYLMIE SSDGPLWWQE IDVPAEGKTF DVQLDKQWAR HDLYISALVI RPGERKANAT PKRAVGVLHL PLGRAERKLA VSLQAPEKMR PKQPLTVRIK ATNADGSIPK QAHVLLSAVD VGILNITDFK TPDPYASLFG RKAYGVDQLD IYGQLIEAGQ GRLASLAFGG DAAMAKGGKR PNTTVTIVAR QSVPVTLNEQ GEGEASVDIP DFNGELRLMA QAWTEDHFGM AEGKTVVAAP LIAELSAPRF LAGGDRTSLA LDLANLSGLA QQLTVDISTE GQVSLATSTQ QRIALAEGQR TTLMIPVQAQ GGLGQGKVHV RVNGLQLPGE PQNIFEREWT LGVRPAYPAV LKHYRVALKD QPWTLPEADL AAFEPAGLEA SLALSSRPPL NLAEQIRALE AYPYGCLEQT TSGLYPSLYA DAQSLKRLGI KGEPAEVRKR KIEMGIEHLL GMQRYNGSFG LWSSDSEEEY WLTAYVTDFL LRARDQGYGV PADALKKANE RLLRYLQERN LIEVDYSENA EHTRLAVQAY AALVLSRSQQ APLGALRSLF ERRADARSGL PLVQLAVALD KMGDKPRSQE ALQAGLGISR SKGWMADYGS SLRDQALILA LLQESDLASN QVDQRLFALS DELAANRWLS TQERNALYLA GRGLLDKPES PWKARLDSAG EVREFSNGDA GMKLEGPLLA SPLSVQNEGS ETVYQQLTLS GYPRQAPAAG GNGMEIRREY LGMNGQVLDL HNVRSGDLVL VHLALKATDR VPDALVVDLL PAGLELENQN LAQSAASLNN ASSAVKQWRE SMQNASVVHQ EYRDDRYVAA LKLDGYGTTH LLYLARAVTP GTYRIPPPQV ESMYRPNLQA VGDGQGEMTV KSR
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