| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4592 |
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| Symbol | |
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| ID | 6113573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5068278 |
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| End bp | 5070632 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641624398 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001751441 |
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| Protein GI | 170723753 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0233923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAGCT TAGCGCGACC GCGCACCCGA GCGGCAAGGA TCCTGCGCGC CTGTGTGATG
GCGCTGGTGG GCATCGCCGG CCTATTGTGG CTGGCTGACC GCATCTGGCC ATTGCCCATG
CCGGCAGATG ATCTGGCGCG GGTCGTGCTG GCCGAAGACG GCACGCCCTT GTGGCGCTTC
GCCGATGCCG AGGGCGTGTG GCGCTACCCG GTCAGCCCCA AAGAGGTTTC GCCTTTGTAC
CTGCAGGCGC TGCTGACCTA TGAGGACCGC TGGTTCTACC ACCACCCGGG GGTCAACCCG
CTGGCGCTGG TGCGCGCGGC ATGGCTGAAC GTGCGCGGCG GGCGGGTTGT TTCAGGTGGC
AGCACGCTGT CGATGCAGGT GGCGCGTTTA CTCGACCCGC ACGACCGCAC GCTGGCAGGC
AAGCTGCGGC AACTGTGGCG TACGGCGCAG TTGGAATGGC ACCTGTCCAA GCACGAGATT
CTGCAGATCT ACCTCAATCG CGCACCCTTC GGTGGCACCT TGCAGGGCGT GGCGGCGGCC
AGTTGGGCTT ACCTCGGCAA ATCGCCGATG CACCTCACGC CTGCCGAAGC GGCGCTGCTG
GCGGTGCTGC CCCAGGCACC CAGCCGGTTG CGCCCGGACC GTCATCCCGC ACGCGCCCAG
CGTGCGCGGG ATAAGGTCCT GCAGCGCCTG GACGAGTATC AGGTGTGGCC TGCCTGGCAG
ATCAAGGAAG CTGCTGAAGA ACCGTTACTG CTGGCCCCGC GTCAGGAGCC AGCCTTGGCA
CCGCTGCTGG CACGCCGCCT GAACACTCCC GGCAGCCCGC CGTTGATCCG CACCACGCTC
GATGCCTCGT TGCAGCGGCG CCTGGAGGAC CTGCTGCTGG GCTGGCGTGC CCGCTTGCCG
GAACGTACCT CCGCGGCCGT GCTGGTGGTG GATGCGCAGA GCATGGCCGT ACGTGCCTAC
CTGGGTTCGA TCGACCTTGC CGATGAGCGC CGTTTCGGCC ACGTCGACAT GGTCCGCTCG
CTGCGTTCAC CAGGCTCGAC CCTCAAGCCG TTCCTTTATG GCATGGCCCT GGACGACGGC
CTGATCCATT CCGAATCGCT GCTGCAGGAT GTACCGCGCC GCTATGGCGA TTACCGGCCT
GGCAACTTCT CGATGGGTTT CAGCGGCCCG GTCTCGGCCA GTTCGGCGCT GGCCTTGTCG
CTGAACCTGC CGGCGGTACA GTTGCTCGAA GCGTATGGGC CCAAACGCTT TGCCGCGCAA
CTGCGCATGG CCGGCATGCC GCTGGCGCTG CCGCCATTGG CCGAGCCTAA TCTGTCGTTG
ATCCTCGGTG GCGCAGGCAG CCGCCTGGAG GAGCTGGTGG GTGGTTATGC GGCATTGGCC
CGGGGCGGCA ACAGTGCGCG GGTGCGTCTG CAACCGCAGG ATCCACTGCT GGAGCGGCGT
CTGCTGTCGC CGGGGGCGGC GTGGATCATC CGGCGTATTC TCAGCGGCCA GGCGCGGCCG
GACCGTGACC CGCACGCGCA GTTGGTGCAA CGCCCGCAGT TGGCCTGGAA AACGGGTACC
AGCTATGGCT TTCGTGATGC CTGGTCGATC GGCGTCGGGC CGCGTTATCT GATTGGCGTG
TGGATTGGCC GGCCCGACGG CACCCCAGTG CCCGGCCAGT TCGGCCTGGC TTCGGCGGCG
CCGCTGATGC TGCAGATTCA CGACCTGCTG ACCAACCGTG ACAGCCAGCG GGGCCTTGGC
GTGCCGGTCG AACAGGTGCC CGCCAGCATT GGCGTGGCCG CGATCTGCTG GCCGCTGGGC
CAGCCCATGA ACCGGCAAGA CCCCAACTGC AGACGCCAGC GCTTTGCCTG GACACTCGAC
GGCACCACCC CGCCGACCCT GCAGGCATCC GATCAACCGC TTGGGCTGGG TTTGCGTGAG
CAGGTCTGGG TCAACGCGCA GGGGCTGCGG GTGGATGGCT CGTGCCCAGG TGCCCACGCG
CGTGATGTCG CCCTTTGGCC GGCCCCGCTC GAGCCTTGGC TGGCGCGGGT CGAGCGGCGT
GCGGCGCGGC TGCCGGCGGT GGACCCAAGC TGCCCGCCGC AGGTACCTGC CACGGCACCG
CCCCTGTCCA TCGTCGGTGT ACGCCCAGGC GACAACCTGC GCCGCCCGGC CACCAGCAGC
GAGCCGTTGC AACTGCAGGT TTCGGCTCTG GGTGGGGGTG GGCGGCGCTG GTGGTTCCTC
AACGGCCAGC CCCTTGGCCA GACTGAGGGC CAGGGCAGCA TGCGGGTGCG CTTTGAGCAG
GCCGGGCAGA TCGAGCTCAG CGCACTGGAT GAGAGCGGTG AAACCGCGCG GGTGGCCTTC
CAGGTCAGCG AGTAG
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| Protein sequence | MPSLARPRTR AARILRACVM ALVGIAGLLW LADRIWPLPM PADDLARVVL AEDGTPLWRF
ADAEGVWRYP VSPKEVSPLY LQALLTYEDR WFYHHPGVNP LALVRAAWLN VRGGRVVSGG
STLSMQVARL LDPHDRTLAG KLRQLWRTAQ LEWHLSKHEI LQIYLNRAPF GGTLQGVAAA
SWAYLGKSPM HLTPAEAALL AVLPQAPSRL RPDRHPARAQ RARDKVLQRL DEYQVWPAWQ
IKEAAEEPLL LAPRQEPALA PLLARRLNTP GSPPLIRTTL DASLQRRLED LLLGWRARLP
ERTSAAVLVV DAQSMAVRAY LGSIDLADER RFGHVDMVRS LRSPGSTLKP FLYGMALDDG
LIHSESLLQD VPRRYGDYRP GNFSMGFSGP VSASSALALS LNLPAVQLLE AYGPKRFAAQ
LRMAGMPLAL PPLAEPNLSL ILGGAGSRLE ELVGGYAALA RGGNSARVRL QPQDPLLERR
LLSPGAAWII RRILSGQARP DRDPHAQLVQ RPQLAWKTGT SYGFRDAWSI GVGPRYLIGV
WIGRPDGTPV PGQFGLASAA PLMLQIHDLL TNRDSQRGLG VPVEQVPASI GVAAICWPLG
QPMNRQDPNC RRQRFAWTLD GTTPPTLQAS DQPLGLGLRE QVWVNAQGLR VDGSCPGAHA
RDVALWPAPL EPWLARVERR AARLPAVDPS CPPQVPATAP PLSIVGVRPG DNLRRPATSS
EPLQLQVSAL GGGGRRWWFL NGQPLGQTEG QGSMRVRFEQ AGQIELSALD ESGETARVAF
QVSE
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