Gene PputW619_4537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4537 
Symbol 
ID6113510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5008346 
End bp5009554 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content66% 
IMG OID641624335 
Producttype II secretion system protein 
Protein accessionYP_001751386 
Protein GI170723698 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCATT CAACACAGCT CTACGCCTGG CAGGGCATCG ATGCCAATGG CGCAGAAGTG 
CGCGGGCAGA TGGCTGGGCG CAGCCCGGCC TATGTGCGGG CCGGGCTGCA GCGCCAGGGC
ATTCGCGTGG CTAGTTTGCG GCCCGCGGGC GGGCTGGTAT GGCGCTGGCC TGCACGTCGG
GCAAAGAGCG ACCCGGCGGG TTTCAGCCGG CAGTTGGCAA CGTTGCTGAG GGCGGGTGTA
CCGCTGCTGC AGGCCTTCCA GGTGATGGGC CGCAGTGGGT GCAGCGCGGC GCAGGCGGCG
TTGCTGGAAC GTTTGAAACA GGATGTGGCG GCGGGGTTGG GGCTGGCGGA TGCGTTGCAG
CGCCACCCGC AGTGGTTCGA CGGGCTTTAC TGCAACCTGG TACGCGTGGG CGAGCAATCC
GGCACCCTCG ACCGGCAGCT TGAGCAACTG GCGGGCATGC TGGAGCAGCG CCAGGCACTG
CTCAAACGGG TGCGCAAGGC GATGCTGTAT CCCCTGCTGC TGTTGCTCAC CGGCCTGGGC
GTGTCGGCGG TGCTGTTGCT GGAAGTGATT CCGCGCTTTG AAAGTCTGTT TGCCGGCTTT
GATGCTGCGT TGCCGGCGTT CACGCAATGG GTCATCGACT TGTCCACAGG GCTGGGCCGC
CATGGGCCGC TGCTGTTGAT AACCCTGCTT GTGGTGGCAT TGGGTATGCG CCAGCTGTAT
CGGCAGCATG CGCCAGCACG CCTGTGGATA TCTTGCCAGG TACTGCGCCT GCCGGTGTTC
GGTCGGCTGC TGGGGCAAGC GGCGCTGGCC CGTTTTGCAC GCAGCCTGGC TACGGCGTAT
GCCGCTGGGG TACCGCTGCT GGACGGGCTG GGCACCGTGG CCAGGGCCTG TGGGGGCGAG
CTGCACGAGC GGGCCATTTT GCGGCTGCGC CAGGGCATGG CCAATGGGCA AGGGCTGCAT
CAAGCGATGG CGGCTGAGCC GTTGTTCCCG CCGCTGCTGG TGCAGCTGAC GGCCATCGGT
GAATCAAGCG GCACCCTGGA CCAGATGCTG GAAAAAGCCG CCAGCCTTTA CGAGGAACAG
GTCAGCCAGG CGCTGGACCA GTTGACCAGC CTGCTGGAGC CAGCCATCGT GCTGGTCCTG
GGCCTGCTGG TCGGTGGCCT GGTGGTGGCG ATGTACCTGC CGATCTTCCA GTTGGGTAGT
TTGATCTGA
 
Protein sequence
MNHSTQLYAW QGIDANGAEV RGQMAGRSPA YVRAGLQRQG IRVASLRPAG GLVWRWPARR 
AKSDPAGFSR QLATLLRAGV PLLQAFQVMG RSGCSAAQAA LLERLKQDVA AGLGLADALQ
RHPQWFDGLY CNLVRVGEQS GTLDRQLEQL AGMLEQRQAL LKRVRKAMLY PLLLLLTGLG
VSAVLLLEVI PRFESLFAGF DAALPAFTQW VIDLSTGLGR HGPLLLITLL VVALGMRQLY
RQHAPARLWI SCQVLRLPVF GRLLGQAALA RFARSLATAY AAGVPLLDGL GTVARACGGE
LHERAILRLR QGMANGQGLH QAMAAEPLFP PLLVQLTAIG ESSGTLDQML EKAASLYEEQ
VSQALDQLTS LLEPAIVLVL GLLVGGLVVA MYLPIFQLGS LI