Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4537 |
Symbol | |
ID | 6113510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 5008346 |
End bp | 5009554 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641624335 |
Product | type II secretion system protein |
Protein accession | YP_001751386 |
Protein GI | 170723698 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCATT CAACACAGCT CTACGCCTGG CAGGGCATCG ATGCCAATGG CGCAGAAGTG CGCGGGCAGA TGGCTGGGCG CAGCCCGGCC TATGTGCGGG CCGGGCTGCA GCGCCAGGGC ATTCGCGTGG CTAGTTTGCG GCCCGCGGGC GGGCTGGTAT GGCGCTGGCC TGCACGTCGG GCAAAGAGCG ACCCGGCGGG TTTCAGCCGG CAGTTGGCAA CGTTGCTGAG GGCGGGTGTA CCGCTGCTGC AGGCCTTCCA GGTGATGGGC CGCAGTGGGT GCAGCGCGGC GCAGGCGGCG TTGCTGGAAC GTTTGAAACA GGATGTGGCG GCGGGGTTGG GGCTGGCGGA TGCGTTGCAG CGCCACCCGC AGTGGTTCGA CGGGCTTTAC TGCAACCTGG TACGCGTGGG CGAGCAATCC GGCACCCTCG ACCGGCAGCT TGAGCAACTG GCGGGCATGC TGGAGCAGCG CCAGGCACTG CTCAAACGGG TGCGCAAGGC GATGCTGTAT CCCCTGCTGC TGTTGCTCAC CGGCCTGGGC GTGTCGGCGG TGCTGTTGCT GGAAGTGATT CCGCGCTTTG AAAGTCTGTT TGCCGGCTTT GATGCTGCGT TGCCGGCGTT CACGCAATGG GTCATCGACT TGTCCACAGG GCTGGGCCGC CATGGGCCGC TGCTGTTGAT AACCCTGCTT GTGGTGGCAT TGGGTATGCG CCAGCTGTAT CGGCAGCATG CGCCAGCACG CCTGTGGATA TCTTGCCAGG TACTGCGCCT GCCGGTGTTC GGTCGGCTGC TGGGGCAAGC GGCGCTGGCC CGTTTTGCAC GCAGCCTGGC TACGGCGTAT GCCGCTGGGG TACCGCTGCT GGACGGGCTG GGCACCGTGG CCAGGGCCTG TGGGGGCGAG CTGCACGAGC GGGCCATTTT GCGGCTGCGC CAGGGCATGG CCAATGGGCA AGGGCTGCAT CAAGCGATGG CGGCTGAGCC GTTGTTCCCG CCGCTGCTGG TGCAGCTGAC GGCCATCGGT GAATCAAGCG GCACCCTGGA CCAGATGCTG GAAAAAGCCG CCAGCCTTTA CGAGGAACAG GTCAGCCAGG CGCTGGACCA GTTGACCAGC CTGCTGGAGC CAGCCATCGT GCTGGTCCTG GGCCTGCTGG TCGGTGGCCT GGTGGTGGCG ATGTACCTGC CGATCTTCCA GTTGGGTAGT TTGATCTGA
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Protein sequence | MNHSTQLYAW QGIDANGAEV RGQMAGRSPA YVRAGLQRQG IRVASLRPAG GLVWRWPARR AKSDPAGFSR QLATLLRAGV PLLQAFQVMG RSGCSAAQAA LLERLKQDVA AGLGLADALQ RHPQWFDGLY CNLVRVGEQS GTLDRQLEQL AGMLEQRQAL LKRVRKAMLY PLLLLLTGLG VSAVLLLEVI PRFESLFAGF DAALPAFTQW VIDLSTGLGR HGPLLLITLL VVALGMRQLY RQHAPARLWI SCQVLRLPVF GRLLGQAALA RFARSLATAY AAGVPLLDGL GTVARACGGE LHERAILRLR QGMANGQGLH QAMAAEPLFP PLLVQLTAIG ESSGTLDQML EKAASLYEEQ VSQALDQLTS LLEPAIVLVL GLLVGGLVVA MYLPIFQLGS LI
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