Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4527 |
Symbol | |
ID | 6113499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4996865 |
End bp | 4998139 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641624324 |
Product | outer membrane porin |
Protein accession | YP_001751376 |
Protein GI | 170723688 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.321558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCC TTTCGATCCA GAAATTAAAA CTTCAATCCA GCCTGCTCGG CGGCACAGTT GTAACGCTTT CGGTATTAGG TTTAGGAGCC CAGGCAAACG CCGAGGGGAT GATCGAGGAT ACGAGCGCTT CGCTTAATCT GCGAAATTTT TACCACAATA GGAATTTTGT AGATCCCACT TATCCACAGG GCATGGCAGA AGAATGGGCG CAGAGCTTCA TCTTGGATGT CCGCTCAGGC TTCACACAAG GGCCTGTGGG CTTCGGTGTG GATATTCTCG GGCTCTACTC CCTAAAACTT GACGGTGGGC GTGGAACTGC AGGCACTCAG CTCCTTCCAG TCCATGATGA CGGCAGAGCC GCCGATGACT TCGGTCGTTT AGGGGTTGCA GTGAAAGCCC GAGTATCGAA GACAGAACTG AAGGTTGGTG AGTGGGTCTC ATCGCTTCCG GTACTGCGTT CAGATGATGG TCGATCTTTA CCTCAGACAT TCAGGGGCGC ACAGATCACA TCTAAAGAAA TCGAAAACGT TACACTTTAT ACTGGTCAGT TTCGAGGCAA TAGCCCGAGA AACGATGGCA GCATGGAAAA AATGTTCATG TCTGGTAGGC CTGGAGCGGT ATCTGATCGA TTCAATTTTT TCGGTGGTGA GTACTCGTTC AATAACCAGG CTACTCAAGT TGGCCTTTGG TATGCAGAAC TGCAAGACAT CTACAAGCAG CAGTATTTTA ATGCGGTACA TAGTCAGCAG TTAGGCGACT GGCGGCTAGG TGCGAATCTT GGCCTGTTCT TGGGAGATGA GTCCGGTTCT GCCAAGGCAG GCGAAATGGA CAACAAGACT GCCACACTGA TGCTTTCTGC AAAGACCGGC GCGAATACGT TTTATGTAGG ATTACAGGGC GTCTATGGAG ATACAGGTTG GATGCGTGTT AACGGGGCCG CTGGCAGTGC GCTCGCGAAC GATACTTTCA TTTCAAGCTA CGATTTTGCC AAAGAGCGCT CTTGGCAGAT TCGTCATGAT TTCAATTTTG TAGCCTTGGG AATACCTGGT CTGACAATTA TGAACCGCTA CCTGTCGGGT AGTAATATTC ATGCCGATGC AGTGACTGAC GGAAAAGAGT GGGGGCGCGA GTCCGAGCTC GCGTATGTTG TGCAGAGCGG ACCGCTGAAA GACATGTCTA TCAAATGGCG AAACTCTTCG CTAAGAAGAG ATTTCAGTAA TTTCGATATT GATGAGAATA GGGTGATTAT AAATTACCCA GTTAAGTTTT TATGA
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Protein sequence | MKILSIQKLK LQSSLLGGTV VTLSVLGLGA QANAEGMIED TSASLNLRNF YHNRNFVDPT YPQGMAEEWA QSFILDVRSG FTQGPVGFGV DILGLYSLKL DGGRGTAGTQ LLPVHDDGRA ADDFGRLGVA VKARVSKTEL KVGEWVSSLP VLRSDDGRSL PQTFRGAQIT SKEIENVTLY TGQFRGNSPR NDGSMEKMFM SGRPGAVSDR FNFFGGEYSF NNQATQVGLW YAELQDIYKQ QYFNAVHSQQ LGDWRLGANL GLFLGDESGS AKAGEMDNKT ATLMLSAKTG ANTFYVGLQG VYGDTGWMRV NGAAGSALAN DTFISSYDFA KERSWQIRHD FNFVALGIPG LTIMNRYLSG SNIHADAVTD GKEWGRESEL AYVVQSGPLK DMSIKWRNSS LRRDFSNFDI DENRVIINYP VKFL
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