Gene PputW619_4526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4526 
Symbol 
ID6113498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4996453 
End bp4996839 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content55% 
IMG OID641624323 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_001751375 
Protein GI170723687 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG TACTTGACGG AAGAGGCATG CGGGCAGCAG TCATGGGGGA GCCGTTTGTA 
GAGCTGGCTA TGCGCAGCGC CAACGGGTTC ACTCTACCGC TCCAGGAGTT CATCAATGAT
CATGCCTGGG GAAGTGTGTG GCTTAGAGAA GGCATCTCCC TCAAGCTTCG AAGCTTGGTG
ACAATCGCCG TGCTGACTGC TTTGAAATCA CCAAAGGAAC TTTCTGGGCA TGTGCGCGGG
GCTCTTAACA ATGGCTGTAC TCCGGAGGAG ATCCAGGAGG TCATTCTTCA CTGCGCGGTT
TATGCCGGTG TACCCGCTTC TGCGGAAGGC TTCCGTGTGG CTAGAGCCGT GATTGAGGAG
GATATTCCAG GTCCAGTTCA GTCATGA
 
Protein sequence
MSDVLDGRGM RAAVMGEPFV ELAMRSANGF TLPLQEFIND HAWGSVWLRE GISLKLRSLV 
TIAVLTALKS PKELSGHVRG ALNNGCTPEE IQEVILHCAV YAGVPASAEG FRVARAVIEE
DIPGPVQS