Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4480 |
Symbol | |
ID | 6113451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4943877 |
End bp | 4944833 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641624276 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_001751329 |
Protein GI | 170723641 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.876181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGCT CTGATCAAGT ACCTGCGCAG GCCCAGGTCG ACCAGGCCAT CGAATGGCTG GTGAAGCTGC GCTTCGACAA CCCCAACCCG GCTACCGAAC AGCAGTTCCA GCAATGGTTG GCCCACCACC CGCACAACGC CCAGGCCTGG CAGCGGGTGA GCACCCTCAG CGACGAGCTG GCGGGGCTCC CCAGCGACCT TAGCCGGCGC ACCCTCGATG GCCGCCAGCG TCAGCGCATC AACCGCCGTG ACCACCTCAA GCTGCTGGCG GTGCTGGCGA TCGGCGGCAG CGCCGGTTGG GCCGCGCGCG AGCCGCTCGG CCTGCCCGCG CTGATGGCCG ACAACAGCAC CGGCACAGGC GAGCGTCGCC GGTTGCAGGG TAGTGATGGC AGCCAGATCC AGCTCAACAC GGCCAGCGCC ATCGACCTGC ACTACAGCGC CGAGCTGCGC GAACTGACCC TGCTGCGCGG CGAAGTCAGC CTGGCCAGCA ACCCTGGCGA CAACCGCCCG TTCCGCATCA CCACCCGGGT CGGCGCCCTG GCTACCCGTG ACGGCCAACT GCTGCTGCGC GAAAATGATC AGGGCCTGTT GCTGGCCGTG CGCCGCGGCA AAGTCACCTT GTTCCCCACC TCCCCTTCAC CACGCGTGGT GCAGGCGGGC GAGGTGTTGC AAGTATCGCC GCACGGGGCT CACGCGCTTG CCTCGTTGCA TGCCGACCCA TGGGGCTGGA CCGACGGTGT GCTCAGCGTG CAACAGATGC CACTGGGCGA GTTCTGCGCC GAACTGGCCC GCTACCGCCC GGGGCTGCTG CGCTGCGCTG GCGATGTGGC CGCGCTGAAG GTATCCGGCA CTTACCAGCT GAACGATACC GAACAGATTC TGCAACTGCT TACCCGCAGC CTGCCGGTAC GTGTCGATTA CCGCACACGC TATTGGGTCA GCGTCGGGGC TGCCTGA
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Protein sequence | MPSSDQVPAQ AQVDQAIEWL VKLRFDNPNP ATEQQFQQWL AHHPHNAQAW QRVSTLSDEL AGLPSDLSRR TLDGRQRQRI NRRDHLKLLA VLAIGGSAGW AAREPLGLPA LMADNSTGTG ERRRLQGSDG SQIQLNTASA IDLHYSAELR ELTLLRGEVS LASNPGDNRP FRITTRVGAL ATRDGQLLLR ENDQGLLLAV RRGKVTLFPT SPSPRVVQAG EVLQVSPHGA HALASLHADP WGWTDGVLSV QQMPLGEFCA ELARYRPGLL RCAGDVAALK VSGTYQLNDT EQILQLLTRS LPVRVDYRTR YWVSVGAA
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