| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4398 |
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| Symbol | |
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| ID | 6113368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4854489 |
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| End bp | 4856228 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641624193 |
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| Product | PTS system, fructose subfamily, IIC subunit |
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| Protein accession | YP_001751247 |
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| Protein GI | 170723559 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTG CCATTGTCAC CGCCTGCCCC AACGGCCAGG TATCCAGCGT GCTGAGTGCG
CGCCTGCTGG CCGCTGCCGC CCAGCGCCGC GGCTGGAAAA CCTGCGTGGA AGTGCAGGAT
GCCGAACACC CCGACCGCCA GCTGAGCACC GCGCAGATCG CTGATGCCGA CTGGGTGCTG
GTTGTCAGCA CCGGGCCGGT TGACCTGGCC CGCTTCGCGG GCAAGCGTTT GTTCCAGAGC
ACACCGGCGC AAGCGCTGGC CGACCGTGAA GGTTTCCTCG ACGAGGCGGC CGCAAATGCC
CAGGTACAGG CCGATGCTCA TCAAGCCGAA CAGCCCCTGG CCACTGCTGG GGCCAAGCTT
GTCGCGGTAA CCGCCTGCCC GACTGGCGTG GCGCACACGT TCATGGCCGC CGAGGCCCTG
CAGCAGGCAG CGCAACAGCT TGGCTATCAA CTTACGGTAG AAACCCAAGG CTCGGTCGGC
GCCCGTAACC CGTTGTCGGC CCAGGCCATT GCCGACGCCG ACGTGGTGCT GCTGGCTGCC
GATATCGAAG TGCCCACCGC CCGTTTTGCC GGCAAGCGTA TCTACCGCTG TGGTACCGGC
ATTGCCCTCA AGCAGGCCCG CGCCACGCTG GACAAGGCCC TTGCCGAGGC CAAGGTGGAA
AGCGCTGGTG ACGCTGCAGC CGCTTCAAGT GCCGGCAAGG CCGAGAAAAC CGGTGTTTAT
AAACACTTGC TGACAGGTGT TTCCTTCATG CTGCCGATGG TGGTGGCAGG CGGCTTGCTG
ATCGCCCTGT CGTTCGTCTT CGGCATCGAA GCCTACAAGG AACCGGGCAC CCTGCCGGCT
GCATTGATGC AGATCGGCGG CGAGGCCGCA TTCAAGCTGA TGGTGCCGTT GCTGGCGGGG
TACATTGCCT GGTCCATCGC CGACCGCCCG GGCCTGGCGC CCGGCATGAT CGGCGGCCTG
CTGGCCAGCA CTCTGGGCGC CGGATTCATC GGCGGTATCG TTGCCGGCTT CCTCGCCGGT
TACAGCGCCA AAGCCATCGC GCGCTGGGCA CGCCTGCCGA GCAGCCTCGA TGCGCTCAAA
CCGATCCTGA TCATTCCGCT GCTGGCGAGC CTTTTCACAG GCCTGGTGAT GATCTACGTG
GTCGGCCAGC CGGTGGCTGC CATGCTCGCG GGCCTGACGC AGTTTCTCGA CAGCATGGGT
ACCACCAACG CCATCCTCCT CGGGCTGCTG CTCGGCGGCA TGATGTGCAT CGACCTGGGC
GGCCCGATCA ACAAGGCGGC CTATGCCTTT TCGGTAGGGC TGCTGGCATC CTCGAGCTAC
GCGCCGATGG CGGCGACCAT GGCAGCGGGC ATGGTGCCGC CGATCGGCCT TGGTATCGCC
ACGTTCCTGG CCCGTCGCAA GTTCGCCCAG AGCGAGCGCG AGGCTGGCAA GGCCGCTCTG
GTGCTGGGTT TGTGCTTCAT TTCCGAAGGC GCCATCCCGT TCGCCGCCAA AGACCCGCTG
CGGGTCATCC CGGCAAGTAT CGCTGGCGGC GCCTTGACCG GCGCGCTGTC GATGTACTTC
GGTTGCAAGC TGATGGCGCC CCATGGCGGG CTGTTCGTGC TGCTGATTCC CAATGCGATC
AACCATGCGC TGCTGTACCT GCTGGCCATT GTCGCGGGTA GCCTGCTGAC AGCGGTGGTG
TATGCGCTGA TCAAGAAGAG CGAGCGGGTG GAAATGGTCG TGGCGCCGGC CAAGGGCTAG
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| Protein sequence | MNIAIVTACP NGQVSSVLSA RLLAAAAQRR GWKTCVEVQD AEHPDRQLST AQIADADWVL
VVSTGPVDLA RFAGKRLFQS TPAQALADRE GFLDEAAANA QVQADAHQAE QPLATAGAKL
VAVTACPTGV AHTFMAAEAL QQAAQQLGYQ LTVETQGSVG ARNPLSAQAI ADADVVLLAA
DIEVPTARFA GKRIYRCGTG IALKQARATL DKALAEAKVE SAGDAAAASS AGKAEKTGVY
KHLLTGVSFM LPMVVAGGLL IALSFVFGIE AYKEPGTLPA ALMQIGGEAA FKLMVPLLAG
YIAWSIADRP GLAPGMIGGL LASTLGAGFI GGIVAGFLAG YSAKAIARWA RLPSSLDALK
PILIIPLLAS LFTGLVMIYV VGQPVAAMLA GLTQFLDSMG TTNAILLGLL LGGMMCIDLG
GPINKAAYAF SVGLLASSSY APMAATMAAG MVPPIGLGIA TFLARRKFAQ SEREAGKAAL
VLGLCFISEG AIPFAAKDPL RVIPASIAGG ALTGALSMYF GCKLMAPHGG LFVLLIPNAI
NHALLYLLAI VAGSLLTAVV YALIKKSERV EMVVAPAKG
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