Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4344 |
Symbol | yajC |
ID | 6113313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4787963 |
End bp | 4788298 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641624138 |
Product | preprotein translocase subunit YajC |
Protein accession | YP_001751193 |
Protein GI | 170723505 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1862] Preprotein translocase subunit YajC |
TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000000136476 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCTTCT TGATCCCCGC CGCCTATGCG GACGCTGCTG CACCCGCCGC TGGCCCAGCC GGCACCGGCT TCGAGTGGAT TTTCCTGGTC GGTTTCCTGG TCATCTTCTA CCTGATGATC TGGCGCCCCC AGGCCAAGCG TGCCAAAGAG CAGAAGAACC TGCTGAGCAA CTTGCAAAAA GGTGATGAAG TTGTCACCAA CGGCGGCATC GCTGGCAAGA TCGTCAAGGT TTCCGATGAT TTCGTGGTTC TCGAAGTGTC CGACACCGTC GAGCTGAAGT TCCAGAAGGG CGCCATTGCC GCGACCCTGC CAAAAGGTAC GCTCAAGGCT ATCTGA
|
Protein sequence | MSFLIPAAYA DAAAPAAGPA GTGFEWIFLV GFLVIFYLMI WRPQAKRAKE QKNLLSNLQK GDEVVTNGGI AGKIVKVSDD FVVLEVSDTV ELKFQKGAIA ATLPKGTLKA I
|
| |