| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4314 |
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| Symbol | |
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| ID | 6113283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4756709 |
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| End bp | 4757872 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641624108 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_001751163 |
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| Protein GI | 170723475 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0146694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCC AGGTCGAAGA CTATTTCGCG CGTGACACCT TCCAGAAAAT GAAGGCGTTC
GCCGACAAGC AGGAAACCCC GTTCGTACTC ATCGATACCC AGATGATCAG CCAGGCCTAC
GACGACCTGC GCGCCGGTTT CGAGTTCGCC AAGGTCTACT ACGCGGTCAA GGCCAACCCG
GCGGTCGAGA TCATCGACCT GCTCAAAGAG AAAGGCTCGA GCTTCGACAT CGCCTCGATC
TATGAGCTGG ACAAGGTGAT GGGCCGTGGC GTCAGCGCCG ACCGTATCAG CTACGGCAAC
ACCATCAAGA AGTCCAAGGA CATCCGTTAC TTCTTTGAAA AAGGTGTGCG CCTGTACGCC
ACCGACTCGG AAGCCGACCT GCGCAACATC GCCAAGGCCG CGCCGGGCTC CAAGGTCTAC
GTACGCATCC TCACCGAAGG CTCCACCACT GCCGACTGGC CACTGTCGCG CAAGTTCGGC
TGCCAGACCG ACATGGCCAT GGACCTGCTG ATCCTGGCCC GCGATCTGGG CCTGGTGCCA
TACGGCATTT CCTTCCACGT GGGTTCGCAA CAGCGCGACA TCAGCGTGTG GGACGCCGCC
ATCGCCAAGG TCAAGGTGAT CTTCGAGCGT CTTAAGGAAG AAGACGGCAT CGAGCTGAAG
CTGATCAACA TGGGTGGCGG TTTCCCGGCC AACTACATCA CCCGCACCAA CAGCCTGGAA
ACCTACGCTG AAGAGATCAT CCGCTTCCTG AAGGAAGACT TCGGCGACGA CCTGCCGGAA
ATCATCCTTG AGCCAGGCCG TTCGCTGATC GCCAACGCCG GTATCCTGGT CAGCGAAGTA
GTGCTGGTTG CGCGCAAGTC GCGCACCGCC GTCGAGCGCT GGGTATACAC CGACGTGGGC
AAATTCTCCG GCCTGATCGA AACCATGGAC GAGTCCATCA AGTTCCCGAT CTGGACCGAA
AAGAAAGGCG AGATGGAAGA AGTGGTCATC GCCGGCCCGA CCTGCGACAG CGCCGACATC
ATGTACGAGC ACTACAAGTA CGGCCTGCCG CTGAACCTGG CGATCGGTGA CCGCCTCTAC
TGGCTGTCGA CCGGTGCCTA CACCACCAGC TACAGCGCGG TGGAATTCAA CGGCTTCCCG
CCGCTGAAGG CCTACTACCT GTAA
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| Protein sequence | MSIQVEDYFA RDTFQKMKAF ADKQETPFVL IDTQMISQAY DDLRAGFEFA KVYYAVKANP
AVEIIDLLKE KGSSFDIASI YELDKVMGRG VSADRISYGN TIKKSKDIRY FFEKGVRLYA
TDSEADLRNI AKAAPGSKVY VRILTEGSTT ADWPLSRKFG CQTDMAMDLL ILARDLGLVP
YGISFHVGSQ QRDISVWDAA IAKVKVIFER LKEEDGIELK LINMGGGFPA NYITRTNSLE
TYAEEIIRFL KEDFGDDLPE IILEPGRSLI ANAGILVSEV VLVARKSRTA VERWVYTDVG
KFSGLIETMD ESIKFPIWTE KKGEMEEVVI AGPTCDSADI MYEHYKYGLP LNLAIGDRLY
WLSTGAYTTS YSAVEFNGFP PLKAYYL
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