Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4309 |
Symbol | |
ID | 6113278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4750275 |
End bp | 4750928 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641624103 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001751158 |
Protein GI | 170723470 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.473063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.447957 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGC TCGATACCTT CGCCCACCTC GACTGGGCCT TGGTGCTGCA ACTGACCTGG CAGCACATCA TGCTGGTCGG CATTGCCGTC GGCCTGGCAA TCCTGGTCGG CGTGCCGCTG GGCATCCTGA TGACCCGCTT CCCGGTGGTG GCCGGGCCGC TGCAAGCCAG CGCCACAGTG CTGCTGACCA TCCCGTCGAT TGCCCTGTTC GGCCTGCTGC TGCCGTTCTA CTCCAAGTTC GGCCAGGGCC TGGGGCCATT GCCTGCGATC ACTGCGGTGT TTCTTTATTC ACTGCTGCCC ATCCTGCGCA ACACCTACCT CGCCCTGACC AACGTCGAGC CTGGCATCCG TGAAGCCGCG CGCGGTATCG GCATGACCTT CGGCCAGCGC CTGCGCATGG TCGAGCTACC CATTGCCGTC CCCGTCATCC TCGCCGGCGT GCGCACTGCC GTGGTGATGA ACATCGGCGT GATGACCATC GCCGCGACCA TCGGTGCCGG TGGCCTGGGC GTGCTCATCC TCACCTCCAT CAGCCGCAGC GACATGTCGA TGCTGCTGGT CGGCGCCGTA CTGGTCAGCC TGCTGGCAAT CATCGCCGAC CTGCTCCTGC AAACCCTGCA ACGTGCCCTG ACTCCAGAAG GACTGCGCTC ATGA
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Protein sequence | MSLLDTFAHL DWALVLQLTW QHIMLVGIAV GLAILVGVPL GILMTRFPVV AGPLQASATV LLTIPSIALF GLLLPFYSKF GQGLGPLPAI TAVFLYSLLP ILRNTYLALT NVEPGIREAA RGIGMTFGQR LRMVELPIAV PVILAGVRTA VVMNIGVMTI AATIGAGGLG VLILTSISRS DMSMLLVGAV LVSLLAIIAD LLLQTLQRAL TPEGLRS
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