| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4296 |
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| Symbol | |
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| ID | 6113265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4735795 |
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| End bp | 4737390 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641624090 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001751145 |
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| Protein GI | 170723457 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.257984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGC TACCGCTACG CGCTGCCCTG GCAGCGGTCA TCCTCGGCGC CGCCGGCAAC
CTGGCGGCCA AGCCGCTGGT GGTGTGCACC GAAGCCAGCC CGGAAGGCTT CGACATCGTT
CAATACACCA CGGCGGTCAC CGCCGATGCC TCGGCTGAGA CGGTGTTCAA CCGCCTGGTC
GACTTCAAGC CCGGCACCAC CGACATCCAG CCAGCCCTGG CCGAACGCTG GGACATCTCG
GCCGATGGCC TGACCTACAC CTTCCACCTG CGCCAAGGGG TGAAGTTCCA CACCACCGGT
TACTTCAAAC CGACCCGCGA TTTCAATGCC GACGACGTGC TGTGGAGCCT GCGTCGCCAG
CTCGACCCTA ACCACCCGTG GCACGACAAG ACCAGCGTCG GCTACCCGTA TTTCGAGAGC
ATGGCCTTCA AGGACCTGCT CAAATCGGTG GACAAGACCG ACGACCACAC CGTGGTCATC
ACCCTGACCC GCCCGCAAGC ACCGTTCCTG CGTGACATGG CCATGGGCTT CACCTCGATC
TACTCCGCCG AATACGGCGA CCAGTTGCTC AAGGCAGGCA AGACCGGCGA CCTCAACAGC
AAACCGGTGG GCACTGGCGC GTTCATCTTC CAGCGCTACA ACAAGGACGC CCAGGTGCGC
TTCAAGGCCA ACCCGGACTA CTTCCGCGGC AAGCCGCCGG CCGACTCGCT GATTTTCGCC
ATCGCCACCG ACAGCAACGT GCGCCTGCAG AAGCTGCGCG CCAATGAATG CCAGGTGGCG
CTTTACCCGA AACCGGACGA CGTGGCGTCG ATCAAGGCTG ATCCCAAGCT GAAGGTCGCC
GAGATCGAGG CCCTGGTCAC CGGCTATATC GCCATGAACA CCGAGCACAA ATACCTCAGC
GATGTGCGCG TGCGCAAAGC CATCAACATG GCCTTCGACC GCCAGACCCA CGTCGACCAG
CTGTTCGGCA AGGGCAATGC GCTGGTGGGG GTAAACCCTT ATCCGCCGAC CATGATCGGC
TACAACAGTG CCAACCAGAA CCCACCCCGT GACCTGGCCA AGGCCCGTGA ACTGCTCCAG
CAGGCCGGCG TGCCGCAAGG CACGGTCATC ACGCTGTTCA CCCGCAATGG CGGCGGCGCG
ACCAACCCCA ACCCACGGCT GTCGGCGGAA ATGCTCCAGT CCGACCTCGC CAAAATCGGC
CTGAAGCTGG ACATCCGTGT GATGGAGTGG GCCGAGATGC TGCGCCGGGC GAAAAACGGC
GAGGCCGACC TGGTCTCCAC CGGCTGGGCC GGCGACAACG GCGACCCGGA CAATTTCCTC
AGCCCCCTGC TCAGCTGCGA TGCAGTCAAA AGTGGCGAGA ACTACGCGCG CTGGTGCAAC
TCGAAGTTTC AGGACCTGAT CACCCGCGCC CGTGAGGTGA TCGACAACGA CGAGCGTGCC
AGGCTCTATG CCGAGGCATT GAAGGTGTAC GATGACGACC AGCCCTGGAT CAGCATGGCG
CATCCGAAGA TGTTCACTGC CATGCGTGAC AACGTGGAGG GTTATGTGAT CAACCCTCTG
ACCAACAACA ACTTCGCCAC CACCCAGGTG AAGTAG
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| Protein sequence | MTSLPLRAAL AAVILGAAGN LAAKPLVVCT EASPEGFDIV QYTTAVTADA SAETVFNRLV
DFKPGTTDIQ PALAERWDIS ADGLTYTFHL RQGVKFHTTG YFKPTRDFNA DDVLWSLRRQ
LDPNHPWHDK TSVGYPYFES MAFKDLLKSV DKTDDHTVVI TLTRPQAPFL RDMAMGFTSI
YSAEYGDQLL KAGKTGDLNS KPVGTGAFIF QRYNKDAQVR FKANPDYFRG KPPADSLIFA
IATDSNVRLQ KLRANECQVA LYPKPDDVAS IKADPKLKVA EIEALVTGYI AMNTEHKYLS
DVRVRKAINM AFDRQTHVDQ LFGKGNALVG VNPYPPTMIG YNSANQNPPR DLAKARELLQ
QAGVPQGTVI TLFTRNGGGA TNPNPRLSAE MLQSDLAKIG LKLDIRVMEW AEMLRRAKNG
EADLVSTGWA GDNGDPDNFL SPLLSCDAVK SGENYARWCN SKFQDLITRA REVIDNDERA
RLYAEALKVY DDDQPWISMA HPKMFTAMRD NVEGYVINPL TNNNFATTQV K
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