Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4240 |
Symbol | valS |
ID | 6113209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4679028 |
End bp | 4681874 |
Gene Length | 2847 bp |
Protein Length | 948 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641624034 |
Product | valyl-tRNA synthetase |
Protein accession | YP_001751089 |
Protein GI | 170723401 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.174379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAGA CCTACCAGCC GCACGCCATC GAAACTTCCT GGTACAACAC CTGGGAGTCC GAAAACTATT TCGCTCCACA AGGTGCAGGT GAGTCCTACA CCATCATGAT CCCGCCACCG AACGTGACGG GTAGCCTGCA CATGGGCCAC GGTTTCAACA ACGCGATCAT GGACGCCCTG ATCCGTTTCC GTCGCATGCA GGGCCGCGAC ACCCTGTGGC AGCCGGGTAC CGACCACGCC GGTATCGCCA CCCAGATGCT GGTCGAGCGC CAGCTCGAAG CCAAGGGCCA GAACCGTCAC GACCTCGGCC GTGACGCCTT CCTGGACAAG GTCTGGGAAT GGAAAGAGCA GTCTGGCGGC AACATCAGCC GGCAGATCCG TCGCCTGGGC TCGTCGGTAG ACTGGAGCCG CGAACGCTTC ACCATGGATG ACGGCTTGTC CGAAGCGGTC AAGGAAGCCT TCGTGCGCCT GCACGAAGAC GGCCTGATCT ACCGTGGCAA GCGCCTGGTC AACTGGGACA CCAAGCTGCA CACGGCCATC TCCGACCTCG AAGTGGAAAA CCATGACGAG AAGGGCCACC TGTGGAACCT ACGCTACCCG CTGGCCGACG GTGCCAGAAC TGCCGACGGC CAGGATTACC TGGTGGTTGC CACCACCCGC CCGGAAACCC TGCTGGGTGA CGCTGCGGTA GCGGTCAACC CGAACGATGA GCGCTACCAG GCACTGATCG GCAAGTTCGT CGAGTTGCCA CTGGTCGGCC GTCGCATCCC GATCATCGCC GATGACTACT GCGACCCCGA GTTCGGTACC GGCTGCGTGA AGATCACCCC GGCACATGAC TTCAATGACT ATGAAGTGGG CAAGCGCCAC AACCTGCCGC TGCTCAACAT CTTCGACAAG AACGCCTTGG TGCTGCCCGC CGCCCAGGCA TTCAACCTCG ATGGCAGCGT CAATGAGCAA GCCGACACCC GCCTGCCCGC CCAGTACGCC GGCCTCGACC GGTTCGTCGC GCGCAAGCAG ATCGTCGCCG ACCTGGACGC TCAGGGGCTG CTGGTCAGCA TCGACGACCA CGCTTTGAAA GTACCGAAGG GCGACCGCTC CGGCACCATC ATCGAGCCAT GGCTGACCGA CCAGTGGTAC GTCTCCACCA AACCGCTGGC CGAGCCTGCG ATTGCTGCCG TTGAAGATGG CCGCATCCAG TTCGTGCCCA AGCAGTACGA AAACATGTAC TTCTCCTGGA TGCGCGACAT CCAGGATTGG TGCATCAGCC GTCAGCTGTG GTGGGGCCAC CGGATCCCGG CCTGGTACGA CGAGGCCGGC CAGGTCTATG TCGGCCGCAA CGAAGCCGAA GTGCGCGCCA AGCACAACCT GGGCGCCGAC GTGGTCTTGC GCCAGGACGA CGACGTGCTC GACACCTGGT TCAGCTCGGG GCTGTGGACC TTCTCCACCC TCGGCTGGCC GGAGCAGACC GAATTCCTCA AGAAATTCCA CTCCACCGAC GTGCTGGTCA CAGGCTTTGA CATCATCTTC TTCTGGGTTG CCCGGATGAT CATGCTGACC ATGCACCTGA TCAAGAACGA GGATGGCACC CCGCAGGTTC CGTTCAAGAC CGTGTATGTG CACGGCCTGG TACGTGACGG CCAGGGCCAG AAGATGTCCA AGTCCAAGGG CAACGTGCTT GACCCGCTGG ACATCGTTGA CGGCATCACC CTGGACGCCC TGCTGGAAAA ACGCACCAGC GGCATGATGC AGCCCAAGCT GGCCGAGAAG ATCGCCAAGC AGACCAAGGC CGAGTTCCCG GAAGGCATTG CCAGCTACGG CACCGACGCC CTGCGCTTCA CCTTCTGCTC GCTGGCCTCC ACTGGCCGCG ACATCAAGTT CGACATGGGC CGCGTCGAAG GCTATCGCAA CTTCTGCAAC AAGATCTGGA ACGCCGCCCG CTATGTGCTG GACAAAGGCG AGGACTGCGG CCAGAACGGC GAAGCCTACG AGCTGTCGCT GGCCGACCGC TGGATCATCT CGCAGCTACA ACGCACCGAA GCCGAAGTAA CCCGCCAGCT CGAGCAGTTC CGTTTCGACC TAGCCAGCCA GGCCCTGTAC GAGTTCATCT GGAACCAGTA CTGCGACTGG TACCTGGAGC TGTCCAAGCC GGTACTGTGG GACGAAAACG CTCCGGTAGA GCGCGCCCGC GGCACCCGCC GCACCTTGGT GCGCGTGCTG GAAGTGGCGC TGCGCCTGGC TCATCCGTTC ATGCCGTTCA TCACCGAAGA AATCTGGCAG CGCATCGCGC CGCTGGCAGG CATCGACGGC AAGACCATCA TGCTCCAGCC GTGGCCAGTG GCCAACGAAA GCCGCATCGA TGCCGCCGCC GAAGGCGATA TCGAATGGCT CAAGGAACTG ATGGTAGGCC TGCGTAACAT CCGCGCCGAA ATGAACATCG GCCCGGGCAA GCCCCTGCCA CTGTTCCTGA AGAACGCCAA CGCCGACGAC CAGCGCCGCC TGCAGGAAAA CGAAGCCCTG CTCAAGAAGC TGGCCAAGGT CGAGTCGTTC ACCGTGCTCG GCGAGGCCGA CGAAGCGCCG CTTTCGGCCA CCGCACTGGT GGGCGATCTG CAGGTGCTGG TGCCGATGGC CGGCCTGATC GACAAGGACG CCGAGCTGGC TCGCCTGAAC AAGGAAATCC AGCGCCTGCA AGGTGAAGTG CAACGCGTCG GCGGCAAGCT GTCGAACGCC GCCTTCGTCG ACAAGGCACC GCCTGCGGTG ATCGAGAAGG AACGCGCCAA GCTGGCCGAG TCCGAGCAGG CCCTGGCCAA CTTCACCGAG CAGCATGCGC GGATCGCTGC GCTGTAA
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Protein sequence | MDKTYQPHAI ETSWYNTWES ENYFAPQGAG ESYTIMIPPP NVTGSLHMGH GFNNAIMDAL IRFRRMQGRD TLWQPGTDHA GIATQMLVER QLEAKGQNRH DLGRDAFLDK VWEWKEQSGG NISRQIRRLG SSVDWSRERF TMDDGLSEAV KEAFVRLHED GLIYRGKRLV NWDTKLHTAI SDLEVENHDE KGHLWNLRYP LADGARTADG QDYLVVATTR PETLLGDAAV AVNPNDERYQ ALIGKFVELP LVGRRIPIIA DDYCDPEFGT GCVKITPAHD FNDYEVGKRH NLPLLNIFDK NALVLPAAQA FNLDGSVNEQ ADTRLPAQYA GLDRFVARKQ IVADLDAQGL LVSIDDHALK VPKGDRSGTI IEPWLTDQWY VSTKPLAEPA IAAVEDGRIQ FVPKQYENMY FSWMRDIQDW CISRQLWWGH RIPAWYDEAG QVYVGRNEAE VRAKHNLGAD VVLRQDDDVL DTWFSSGLWT FSTLGWPEQT EFLKKFHSTD VLVTGFDIIF FWVARMIMLT MHLIKNEDGT PQVPFKTVYV HGLVRDGQGQ KMSKSKGNVL DPLDIVDGIT LDALLEKRTS GMMQPKLAEK IAKQTKAEFP EGIASYGTDA LRFTFCSLAS TGRDIKFDMG RVEGYRNFCN KIWNAARYVL DKGEDCGQNG EAYELSLADR WIISQLQRTE AEVTRQLEQF RFDLASQALY EFIWNQYCDW YLELSKPVLW DENAPVERAR GTRRTLVRVL EVALRLAHPF MPFITEEIWQ RIAPLAGIDG KTIMLQPWPV ANESRIDAAA EGDIEWLKEL MVGLRNIRAE MNIGPGKPLP LFLKNANADD QRRLQENEAL LKKLAKVESF TVLGEADEAP LSATALVGDL QVLVPMAGLI DKDAELARLN KEIQRLQGEV QRVGGKLSNA AFVDKAPPAV IEKERAKLAE SEQALANFTE QHARIAAL
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