Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4218 |
Symbol | |
ID | 6113187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4652606 |
End bp | 4655194 |
Gene Length | 2589 bp |
Protein Length | 862 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641624012 |
Product | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
Protein accession | YP_001751067 |
Protein GI | 170723379 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein [TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACAG GTCCAACTAG CCCGTCCCCT CTTCCCCGCC GTACCGGCCA GCTGTCCCTG CTGACCCTGG CCCTGCTCGC CAGTGGCGCC TGCGGCTTGC CGGCGCTGGC CGCAGAACCT GCGCAGGCGA CAAGCCCGCG CATGGGCGAC TACCGCTTCA GCATCACCCA GCAGCCCCTG GTCGAGGCAA TCAACGCCTT CAGCCAGGTG ACCGGCTGGC AGGTGGGTTT CAGCGCCGAA CTGGCCGACG GTGTGGCTTC GCCAGGTGTC CACGGCTCGC TGCCTCCGGA AGCGGCACTG AAACAACTGC TGCAAGGTAC CGGCCTGGGC TATCGCAAGA TCAGCAACGG CAATGTGGTG CTGGAGCGCC AGACGGCGGG CAATGCCATT GCCCTGCAGC AATTGACCGT CAGCGCCACC CGTAGCGCCC AGGACGTCAG CCAGGTACCC AGCACCGTGA GCGTACAGAC CCGCGAACAG CTGGACCGGC AGAACGTCAA CAGCATCAAG GAACTGGTGC GCTACGAGCC TGGCGTGTCG GTCGGCGGCG TTGGCCAGCG CAGCGGCCTG AACGGTTACA ACATCCGCGG TATCGACGGC GAACGCATCC TCACCCAGAT CGACGGTGTG TCGATCCCCG ACAGCTTCTT CTACGGCCCC TACGCCCAGA CACAGCGCAA CTACGTCGAT CCCGAGATCG TCAAGCGCGT GGAAATCCTG CGCGGCCCGG CCTCGGTGCT GTACGGCAGT AATGCCATCG GCGGTGCGGT GAGCTACTTC ACCCTCGACC CGGACGACAT CATCAAGCCC GGCAAGGATG TCGGCGCGCG GCTGAAGACC GGCTACAGCT CGGCCGACGA CAGCTGGCTG ACCTCCGCCA CCGTGGCCGG CCGCCAGGGC GATTTCGATG GCTTGCTGCA CGTGAGCCAG CGCAACGGCC ACGAAACCGA ATCCTACGGT GAAGACGGCG GCACCGGCCT GTCGCGTACC GAAGCCAACC CGGAAGACGT GCGCACCACC AACGTGCTGG CCAAGCTTGG CTGGAACTAC GCCGACGACG CGCGCCTGGG CTTCACCTAT GAACGCTACA AGGATGACCG TGACCAGAAC ATCCTAAGCG CCGTGGGCGG TCCGTTCATT CCAGGCTTTG GTGCCATGAA CTCCTACCGC ATGCGCCAGG GCAACGACAC CGTCACCCGC GAGCGCTTCG GCATAAACCA CGAGTTCGGC CTCGACAGCC TGGTCGCCGA CCACGTGAAA TGGAGCCTGA ACTACCAGAT CGCCAAGACC GACCAGCGCA CCGATGAGCT GTATGTCGCG TCGGGGCGGC AAGTGCTGCG CGACCGCCAG ACCACCTACA AGGACCGCCA ATGGGTGTTC GATGCCCAGC TGGACAAAGC CTTCAGCATC GGCCAGACCG ATCACCTGCT GACCTACGGC ACCACCATAA AGCATGAAGA AGTGACCGGC TCACGCAGCG GCTCCGGCAC CTGTGTGGCC ATTGGCGGTA GCTGCACCGC CATCGGCCAG GACAGCTCGC GCGACGGCCA GGCCCTGGTC AGCGATTTCC CGGACCCGAC CATCAACACC TACAGCCTGT TCGTGCAGGA TGAAATCCGC TGGAACAACT GGACCTTCCT GCCAGGTGCC CGCTACGACT ACACGCGCAT GGAGCCCAAG TTCACCGACG CGTTCCTGCG TGGCATTCAG GGCTCGGGCG CAGCGCCAGG CGCCCTCGAC GACTCGGACA AGAAGTGGCA CCGCGTGTCG CCCAAGTTCG GCCTGACCTA CGCCTTCAAC GACAACTACA CCTGGTACGG CCAGTACGCC GAAGGCTTCC GCACGCCGAC AGCCAAGTCG ATGTACGGCC GCTTCGAGAA CCCGACACTG GGCTACAGCG TGCAGGGCAA CCCCGGGCTT GAGCCGGAGA AGAGCAAGAG CTACGAGACC GGCCTGCGTG GCAACTTCGA TGCCGGTAAC TTCAGCGCTG CGGTCTTCTA CAACAAGTAC CGCGACTTCA TCGACGAAGA CGCCGTGCAG TCGGCCAACC TGGAAACCAC TTTCCAGGCC CACAACATCA AGCACGCCAC CATCAAGGGC GCCGAGGTCA AGGGCCGCCT CAACCTCGAC CACTTCGGTG CGCCAGAAGG CCTGTACACC CAGGGTTCGA TCGCTTACGC CAACGGCCGC AACGACGACA ACGGCCAGCC GCTGAACAGC GTCAACCCAC TGACCGGCGT GTTCGGCCTG GGTTATGAGC AGCCAAACTA CGGTGGCCTG TTGAGCTGGA CCCTGGTCAA GCGCAAGACC CGCGTCGACG ACACCACCTT CTTTGCCCCC GACGGCGCAA GCTCGCAGTT CCGCACGCCC GGCTACGGTG TGCTGGACCT GAGCGGCTTC TACAAGGTGA CCGACGATGT CACGGTCAAT GCCGGGCTAT ACAACCTCAC CGACAAGAAG TACTGGCAAT GGGATGACGT GCGCGGCTAC GACGGCCAGG GTGAAGCGGG TGTGACCCAG CCTGCCAACC TCGACCGCCT GACCATGCCA GGGCGCAACT TCGCCATCAA TGTGGTTTGG GATATCTGA
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Protein sequence | MSTGPTSPSP LPRRTGQLSL LTLALLASGA CGLPALAAEP AQATSPRMGD YRFSITQQPL VEAINAFSQV TGWQVGFSAE LADGVASPGV HGSLPPEAAL KQLLQGTGLG YRKISNGNVV LERQTAGNAI ALQQLTVSAT RSAQDVSQVP STVSVQTREQ LDRQNVNSIK ELVRYEPGVS VGGVGQRSGL NGYNIRGIDG ERILTQIDGV SIPDSFFYGP YAQTQRNYVD PEIVKRVEIL RGPASVLYGS NAIGGAVSYF TLDPDDIIKP GKDVGARLKT GYSSADDSWL TSATVAGRQG DFDGLLHVSQ RNGHETESYG EDGGTGLSRT EANPEDVRTT NVLAKLGWNY ADDARLGFTY ERYKDDRDQN ILSAVGGPFI PGFGAMNSYR MRQGNDTVTR ERFGINHEFG LDSLVADHVK WSLNYQIAKT DQRTDELYVA SGRQVLRDRQ TTYKDRQWVF DAQLDKAFSI GQTDHLLTYG TTIKHEEVTG SRSGSGTCVA IGGSCTAIGQ DSSRDGQALV SDFPDPTINT YSLFVQDEIR WNNWTFLPGA RYDYTRMEPK FTDAFLRGIQ GSGAAPGALD DSDKKWHRVS PKFGLTYAFN DNYTWYGQYA EGFRTPTAKS MYGRFENPTL GYSVQGNPGL EPEKSKSYET GLRGNFDAGN FSAAVFYNKY RDFIDEDAVQ SANLETTFQA HNIKHATIKG AEVKGRLNLD HFGAPEGLYT QGSIAYANGR NDDNGQPLNS VNPLTGVFGL GYEQPNYGGL LSWTLVKRKT RVDDTTFFAP DGASSQFRTP GYGVLDLSGF YKVTDDVTVN AGLYNLTDKK YWQWDDVRGY DGQGEAGVTQ PANLDRLTMP GRNFAINVVW DI
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