| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4199 |
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| Symbol | |
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| ID | 6113168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4630414 |
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| End bp | 4632087 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641623993 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001751048 |
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| Protein GI | 170723360 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.999684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC TCAAAGACCC TTCGAAGAAG TACCGCGCCT TCCCGACCAT CGAGCTGCCA
GACCGTACCT GGCCGTCGAA GACCATCACC GAAGCGCCGA TCTGGTGCAG CTCGGACCTG
CGTGATGGCA ACCAGTCGCT GATCGAGCCG ATGGACTCGG AGAAGAAGCT GCGGTTCTGG
AAGACTTTGG TGCAGGTTGG CGTGAAGGAA ATCGAAGCCT CGTTCCCGTC CGCCTCCCAG
ACCGATTTCG ACTTCGTGCG CACCTTGATC GAAGATGGCC ACATCCCGGA CGACACCACC
ATTCAGGTGC TCACCCAGGC CCGTGAAGAC CTGATCGCGC GCACCTTCGA ATCGCTGCGC
GGGGCCAAGA AGGCCATCGT CCACCTGTAC AACGCCACCA GCCCGTCGTT CCGCCGCATC
GTCTTCAACC AGGACAAGCA AGGCGTGAAA GACATCGCGG TGAACGCGGC CAAACTGTTC
GTCAAATACG CCGCCCAGCA GCCGGAAACC CAGTGGACGT TCCAGTACTC GCCGGAAACC
TTCAGCGCCA CTGAGCTTGA GTTCGCCAAG GAAGTCTGCG ACGCGGTCAT CGAAGTGTGG
AACCCGACGC CTGAGCACAA GGTCATCCTC AACCTGCCGG CCACCGTGGA AGTTGCCACG
CCGAACATCT ACGCCGACCA GATCGAGTGG TTCTGCCGCA ACATCAGCCG CCGCGACAGC
GTGATCATCA GCCTGCACTG CCACAACGAC CGTGGCACCG GCATCGCTGC CACCGAGCTG
GGCCTGATGG CCGGCGCCGA CCGTGCCGAA GGTTGCCTGT TCGGCAACGG CGAGCGCACC
GGCAACGTCG ACCTGGTGAC CTTGGCGCTG AACCTCTACA CCCAGGGCAT CGACCCGCAA
CTGGACTTCT CCGACATCGA CGGCGTGCGC AAAGTGGTCG AAGAATGCAA CCAGTTGCCG
GTGCATCCGC GTCACCCGTA TGTCGGCGAC CTGGTCCACA CCGCATTCTC CGGCTCGCAC
CAGGACGCCA TCCGCAAGGG CTTCGCCAAG CAGCAGGACG GTGAGCTGTG GGAAGTGCCG
TACCTGCCGA TCGACCCGGC CGACATCGGC CGCAGCTACG AGGCGGTTAT CCGCGTCAAC
AGCCAGTCAG GCAAAGGCGG CATCACCTAT CTGCTCGAGC AGGAGTACGG CATCAGCCTG
CCGCGCCGCA TGCAGATCGA ATTCAGCCAG GTGGTACAGG GTGAAACCGA CCGCCTTGGC
CTGGAAATGA CCGCGCAGCA GATCTACAGC CTGCTGCACA AGGAATACCT CCAGGCCAAC
AGCCCGTATG CGCTGGTCAG CCACCGCCTG CAGGAAGAAA ACGGCCACAG CGCCGTGGAA
GTAGAAGTCG CCGGTGAAGG CGAGACTACC CTGCACTGGC GCGGCAAGGG CAATGGTGCC
CTCGAAGCCC TGGTAGCCGG CCTGCCGATT GCCGTGGAGA TCATGGACTA CAACGAGCAC
GCCATTGGTG CCGGCACCAA TGCCAAGGCC GCTGCCTACA TCGAGCTGCG CGTGGCCGGT
GGCCGCCCGG TACACGGCGT AGGCATCGAC GAGAACATCA CCACTGCCAG CTTCAAGGCG
CTGTTCAGTG CACTGAACCG CTCCCTGAGC CAGCAAGAGG CCAAGGCTGC GTAA
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| Protein sequence | MTMLKDPSKK YRAFPTIELP DRTWPSKTIT EAPIWCSSDL RDGNQSLIEP MDSEKKLRFW
KTLVQVGVKE IEASFPSASQ TDFDFVRTLI EDGHIPDDTT IQVLTQARED LIARTFESLR
GAKKAIVHLY NATSPSFRRI VFNQDKQGVK DIAVNAAKLF VKYAAQQPET QWTFQYSPET
FSATELEFAK EVCDAVIEVW NPTPEHKVIL NLPATVEVAT PNIYADQIEW FCRNISRRDS
VIISLHCHND RGTGIAATEL GLMAGADRAE GCLFGNGERT GNVDLVTLAL NLYTQGIDPQ
LDFSDIDGVR KVVEECNQLP VHPRHPYVGD LVHTAFSGSH QDAIRKGFAK QQDGELWEVP
YLPIDPADIG RSYEAVIRVN SQSGKGGITY LLEQEYGISL PRRMQIEFSQ VVQGETDRLG
LEMTAQQIYS LLHKEYLQAN SPYALVSHRL QEENGHSAVE VEVAGEGETT LHWRGKGNGA
LEALVAGLPI AVEIMDYNEH AIGAGTNAKA AAYIELRVAG GRPVHGVGID ENITTASFKA
LFSALNRSLS QQEAKAA
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