| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4156 |
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| Symbol | rimM |
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| ID | 6113125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4582324 |
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| End bp | 4582860 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641623950 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_001751005 |
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| Protein GI | 170723317 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.12723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.417935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGA CGCCAGAAAA GGCTGACGAC CTCATCGTCG TTGGCAAGAT TTTTTCGGTT
CACGGCGTTC GCGGCGAGGT GAAGGTGTAT TCCTTTACCG ATCCGATTGA AAACCTGTTG
GATTATCCAC GCTGGACGCT TCGGCACGAA GGCAAGGTAA AGCAGGTCGA GCTGGTCAGC
GGTCGTGGCT CCCAAAAGGG TCTGGTCGTT AAACTGAAAG GCCTCGATGA TCGTGATGAA
GCGCGTCTTC TGAGCGGCTT CGAAATCTGC ATCCCGCGGA GCCTTTTGCC CAACCTGGCC
GCAGACGAGT ACTACTGGTA CCAGCTGCAG GGCCTGAAGG TCATCAACCA GGACGAACAG
CTGTTCGGCA AGGTCGATCA CCTGTTGGAG ACCGGTGCGA ACGATGTAAT GGTGGTCAAA
CCCTGCGCAG GCAGCCTGGA TGATCGCGAG CGTCTGTTGC CCTATACGGC GCAATGTGTG
CTGGCAATCG ACCTGGAAGC AGGCGTGATG CGGGTTGAAT GGGACGCGGA CTTCTAA
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| Protein sequence | MNATPEKADD LIVVGKIFSV HGVRGEVKVY SFTDPIENLL DYPRWTLRHE GKVKQVELVS
GRGSQKGLVV KLKGLDDRDE ARLLSGFEIC IPRSLLPNLA ADEYYWYQLQ GLKVINQDEQ
LFGKVDHLLE TGANDVMVVK PCAGSLDDRE RLLPYTAQCV LAIDLEAGVM RVEWDADF
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