| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4121 |
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| Symbol | lysS |
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| ID | 6113090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4547434 |
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| End bp | 4548936 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641623915 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001750970 |
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| Protein GI | 170723282 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC TCAAGACCGA ATCGCAAGAC CTGCAACAGG AAGAAAACAC CCTGATCGCC
CTGCGCAAGG AAAAGCTTGC CGCTGAGCGC GAGAAGGGTC AGGCCTTCCC CAACGACTTC
CGCCGCGACA GCTACTGCAA CGACCTGCAG AAGCAATACG TCGACAAGAC CAAGGAAGAG
CTGGAAGCTG CAGCGATCCC GGTCAAGGTA GCCGGTCGCA TCATGCTCAA CCGTGGCTCG
TTCATGGTGA TCCAGGACAT GACCGGGCGC ATCCAGGTCT ACGTCAACCG CAAGACCCTG
CCGGAAGAAA CCCTGGCCGC GGTCAAGACC TGGGACCTGG GCGACATCAT CGCCGCCGAA
GGCACCCTGG CCCGTTCCGG CAAGGGCGAC CTGTACGTCG AAATGACCAA CGTACGCCTG
CTGACCAAGT CGCTGCGCCC GCTGCCGGAC AAGCACCACG GCCTGACCGA TACCGAGCAG
CGCTACCGCC AGCGTTATGT CGACCTGATG GTCAACGAAG AAACCCGCCA CACCTTCCGC
GTGCGTTCGC AGGTGATCTC GCATATCCGC AAGTTCCTCA TCGACCGCGA CTTCCTCGAA
GTCGAAACGC CGATGCTGCA GACCATTCCT GGCGGTGCCG CGGCCAAACC GTTCGAGACC
CACCACAACG CCTTGGACAT GGCCATGTTC CTGCGTATCG CGCCGGAGCT GTACCTCAAG
CGCCTGGTGG TCGGTGGTTT CGAGAAAGTG TTCGAGATCA ACCGCAACTT CCGTAACGAA
GGCGTTTCGA CCCGGCACAA CCCCGAGTTC ACCATGCTCG AGTTCTACCA GGCCTACGCT
GACTACCGCG ACAACATGGA CCTCACCGAG GAACTGTTCC GTGAGCTTGC CCAGCTGGTC
CTGGGCAGCA CCGATGTACC GTATGGCGAC AAGGTGTTCC ACTTCGGTGA GCCGTTCGTG
CGCTTGTCGG TGTTCGACTC GATCCTCAAG TACAACCCGG AGCTGACCGC AGCCGACCTG
CAGGACGTTG ACCGCGCCCG CGACATCGCC AAGAAAGCCG GTGCCAAGGT GTTGGGCCAT
GAAGGCCTGG GCAAACTGCA GGTGATGATT TTCGAAGAGC TGGTCGAGCA CAAGCTGGAG
CAGCCGCACT TCATTACCGA ATACCCGTTC GAAGTTTCGC CGTTGGCCCG CCGTAACGAC
GACAACCCGG CCGTGACCGA CCGCTTCGAG CTGTTCATCG GTGGCCGCGA GATCGCCAAC
GCCTACTCCG AGCTCAACGA CGCCGAAGAC CAGGCAGAGC GCTTCCTGGC CCAGGTGGCC
GAGAAGGACG CCGGTGACGA CGAAGCCATG CACTACGATG CCGACTTCGT TCGCGCCCTG
GAGTACGGCA TGCCACCGAC TGCTGGTGAA GGCATCGGCA TCGACCGCCT GGTGATGCTG
CTGACCAACT CGCCGTCGAT TCGCGACGTG ATCCTGTTCC CGCACATGCG CCCACAGGCT
TGA
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| Protein sequence | MSDLKTESQD LQQEENTLIA LRKEKLAAER EKGQAFPNDF RRDSYCNDLQ KQYVDKTKEE
LEAAAIPVKV AGRIMLNRGS FMVIQDMTGR IQVYVNRKTL PEETLAAVKT WDLGDIIAAE
GTLARSGKGD LYVEMTNVRL LTKSLRPLPD KHHGLTDTEQ RYRQRYVDLM VNEETRHTFR
VRSQVISHIR KFLIDRDFLE VETPMLQTIP GGAAAKPFET HHNALDMAMF LRIAPELYLK
RLVVGGFEKV FEINRNFRNE GVSTRHNPEF TMLEFYQAYA DYRDNMDLTE ELFRELAQLV
LGSTDVPYGD KVFHFGEPFV RLSVFDSILK YNPELTAADL QDVDRARDIA KKAGAKVLGH
EGLGKLQVMI FEELVEHKLE QPHFITEYPF EVSPLARRND DNPAVTDRFE LFIGGREIAN
AYSELNDAED QAERFLAQVA EKDAGDDEAM HYDADFVRAL EYGMPPTAGE GIGIDRLVML
LTNSPSIRDV ILFPHMRPQA
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