| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4064 |
|---|
| Symbol | pyrG |
|---|
| ID | 6113033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4484396 |
|---|
| End bp | 4486024 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641623858 |
|---|
| Product | CTP synthetase |
|---|
| Protein accession | YP_001750913 |
|---|
| Protein GI | 170723225 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0504] CTP synthase (UTP-ammonia lyase) |
|---|
| TIGRFAM ID | [TIGR00337] CTP synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0000300969 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCT ACATATTCGT CACGGGCGGT GTTGTTTCTT CATTGGGGAA AGGCATTGCC
TCGGCTTCCC TGGCGGCCAT CCTGGAAGCG CGGGGGCTAA AGGTCACCAT GCTCAAGCTG
GATCCGTACA TCAACGTCGA TCCTGGCACC ATGAGTCCGT TCCAGCACGG TGAAGTATTC
GTCACCCACG ACGGCGCCGA GACCGACCTC GACCTGGGCC ACTACGAGCG GTTCATCCGC
ACGACCATGA CCCAGAACAA CAACTTCACC ACCGGCCGCA TCTACGAGCA CGTACTGCGC
AAAGAGCGTC GTGGTGATTA CCTGGGCGCG ACCATTCAGG TCATCCCGCA CATCACCGAC
GAGATCAAGC GTCGCATCAT CAAGGGCGCC GGCGATGCCG ATGTGGCCCT GGTGGAAATC
GGTGGTACCG TGGGCGACAT CGAGTCGCAG CCGTTCCTCG AGGCGATCCG CCAGTTGCGT
TTCGAAGTCG GCGCCAAGCG CGCGATGCTG ATGCACCTGA CGCTGGTGCC GTACATCGCC
ACCGCTGGCG AGACCAAGAC CAAGCCGACT CAGCACTCGG TCAAGGAACT GCGCTCCATC
GGCCTGCAGC CTGACGTGCT GGTCTGCCGC TCCGACCACC CGATCGATAG CTCGTCGCGC
CGCAAGATCG CTCAATTCAC CAACGTTGAA GAGCGTGCGG TGATTGCCCT TGAAGACGCC
GACACCATCT ACAAGATCCC AGGCATTCTG CATGCCCAAG GCCTGGACGA TTTCGTCGTC
GAGCGCTTCG GCCTGCAGTG CAACAGCGCC GACCTGTCCG AATGGGACAA GGTAGTCGAC
GCCAAGCTCA ATCCTGAGCA CGAAGTGACC ATCGCCATGG TCGGCAAATA CATGGAGCTG
CTGGATGCAT ACAAGTCGCT GATCGAAGCG ATGAGCCATG CCGGCATCAC CAACCGCACC
AAGGTCAACC TGCGTTACAT CGATTCTGAA GATATCGAAA ACCAGGGCAC CAGCCTGCTC
GAAGGCGCAG ACGCCATTCT GGTACCGGGC GGTTTCGGCC TGCGTGGCGT GGAAGGCAAG
ATCACTGCGG TGCAGTATGC CCGTGAGAAC AAGGTGCCAT ACCTGGGTAT CTGCCTGGGC
ATGCAAGTTG CCGTGATCGA ATTCGCCCGC AATGTGATGG GCTGGAAAGA CGCCAACTCC
ACCGAGTTCG ATCGCAACAG CGGCCACCCG GTCGTTGGCC TGATCACCGA GTGGGCCGAT
GCCACTGGCG CTGTCGAGAC CCGTACCGAA GCCTCCGACC TGGGGGGCAC CATGCGTCTG
GGCGCGCAGG ATTGCCAACT GGCTGCCGGC TCCAAGGTGC ATGACTGCTA TGGCAAGGAC
GTGATCACCG AGCGTCATCG CCATCGCTAC GAAGTGAACA ACAACCTGCT GCCGCAACTG
GTCGATGCCG GCCTGGTGGT ATCCGGTCGT TCCGAAGACG GTGCCCTGGT TGAAGTGGTC
GAGTCCAAGG ACCACCCGTG GTTCGTCGCC TGCCAGTTCC ACCCCGAGTT CACCTCGACC
CCGCGTGATG GTCACCCGCT GTTCAGTGGC TTCGTCAAGG CTGCTCTGGC GCAGAAGAAC
AAGGCCTGA
|
|---|
| Protein sequence | MTRYIFVTGG VVSSLGKGIA SASLAAILEA RGLKVTMLKL DPYINVDPGT MSPFQHGEVF
VTHDGAETDL DLGHYERFIR TTMTQNNNFT TGRIYEHVLR KERRGDYLGA TIQVIPHITD
EIKRRIIKGA GDADVALVEI GGTVGDIESQ PFLEAIRQLR FEVGAKRAML MHLTLVPYIA
TAGETKTKPT QHSVKELRSI GLQPDVLVCR SDHPIDSSSR RKIAQFTNVE ERAVIALEDA
DTIYKIPGIL HAQGLDDFVV ERFGLQCNSA DLSEWDKVVD AKLNPEHEVT IAMVGKYMEL
LDAYKSLIEA MSHAGITNRT KVNLRYIDSE DIENQGTSLL EGADAILVPG GFGLRGVEGK
ITAVQYAREN KVPYLGICLG MQVAVIEFAR NVMGWKDANS TEFDRNSGHP VVGLITEWAD
ATGAVETRTE ASDLGGTMRL GAQDCQLAAG SKVHDCYGKD VITERHRHRY EVNNNLLPQL
VDAGLVVSGR SEDGALVEVV ESKDHPWFVA CQFHPEFTST PRDGHPLFSG FVKAALAQKN
KA
|
|---|
| |