| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3998 |
|---|
| Symbol | ruvB |
|---|
| ID | 6112964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4421841 |
|---|
| End bp | 4422887 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641623789 |
|---|
| Product | Holliday junction DNA helicase RuvB |
|---|
| Protein accession | YP_001750847 |
|---|
| Protein GI | 170723159 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
|---|
| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGAAG CCGACCGCCT GATTGCCGCC AGTGGCCGCG ACCGCGAAGA AGTCCAGGAC
CGTGCCATCC GCCCGCTGCG CCTGGACGAA TACATCGGCC AGCCGGTGGT GCGCGAGCAG
ATGGCGCTGT TCATCCAGGC TGCCCGCGGT CGCAACGAAT CGCTCGACCA TACGCTAATC
TTCGGCCCGC CAGGGTTGGG TAAAACCACC CTGGCCAATA TCATCGCCCA GGAAATGGGC
GTATCGGTCA AAAGTACCTC GGGGCCGATT CTCGAGCGCC CGGGCGACCT GGCAGCCATG
CTGACCAACC TCGAACCGCA TGACGTCCTG TTCATAGACG AGATTCACCG GTTATCACCG
GTTGTCGAGG AGGTGCTGTA CCCGGCCATG GAGGACTTCC AGCTCGATAT CATGATCGGC
GAAGGCCCGG CTGCCCGCTC GATCAAACTC GACTTGCCGC CCTTCACCTT GGTGGGGGCC
ACAACCCGCG CCGGTATGCT CACAAACCCG CTGCGCGACC GCTTCGGTAT CGTCCAGCGA
CTTGAGTTCT ACAGCGACAA GGACCTGGCG ACCATCGTCA GCCGGTCGGC CAATATTCTG
GGGCTGGTCA TCGAGGACCA GGGGGCTTAC GAAATCGCCC GCCGTGCCCG CGGCACGCCG
CGTATTGCCA ACCGCTTGCT GCGCCGCGTG CGTGACTACG CCGAGGTGCG CGGCAAAGGG
CAGATCACCA AGGCAGTAGC CGATTTGGCG CTCAACCTGC TGGACGTAGA TGAGCGTGGT
TTCGACCATT CCGACCGCCG TCTGCTGCTG ACCATGATCG AGAAGTTCGA TGGTGGCCCG
GTGGGGGTGG ATAACCTGGC GGCAGCGATC AGCGAGGAGC GTCATACCAT CGAGGATGTG
CTCGAACCCT ACCTGATTCA GCAGGGCTAT ATCATGCGTA CGCCCCGTGG TCGTGTGGTC
ACTCGGCACG CCTACCTGCA CTTTGGCCTG AATGTTCCCG GGCGCCTGGG TGAGGGGGCA
GATTTTTCCG AAGCAGGCGA TGAATGA
|
|---|
| Protein sequence | MIEADRLIAA SGRDREEVQD RAIRPLRLDE YIGQPVVREQ MALFIQAARG RNESLDHTLI
FGPPGLGKTT LANIIAQEMG VSVKSTSGPI LERPGDLAAM LTNLEPHDVL FIDEIHRLSP
VVEEVLYPAM EDFQLDIMIG EGPAARSIKL DLPPFTLVGA TTRAGMLTNP LRDRFGIVQR
LEFYSDKDLA TIVSRSANIL GLVIEDQGAY EIARRARGTP RIANRLLRRV RDYAEVRGKG
QITKAVADLA LNLLDVDERG FDHSDRRLLL TMIEKFDGGP VGVDNLAAAI SEERHTIEDV
LEPYLIQQGY IMRTPRGRVV TRHAYLHFGL NVPGRLGEGA DFSEAGDE
|
|---|
| |