Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3996 |
Symbol | |
ID | 6112962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4420565 |
End bp | 4421260 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641623787 |
Product | protein TolQ |
Protein accession | YP_001750845 |
Protein GI | 170723157 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.523638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAGCTA ACGTCGTCGA CCATACCTCC ATGTGGAGTC TGGTCAGCAA TGCCAGCGTG GTGGTACAGC TGGTAATGCT GACCCTGGTG GCCGCCTCGG TCACCTCATG GATCATGATC TTCCAGCGCA GCACCATGCT GCGCGCCGGT CGTCGTGCGC TGGATGCCTT CGAGGAACGC TTCTGGTCGG GTATCGACCT GTCCAAGCTG TACCGTCAGG CAGGCAGCAA CCCGGACCCG GATTCGGGCG TGGAGCAGGT CTTCCGGGCC GGCTTCAAGG AGTTCTCGCG TCTGCGCCAG CAGCCGGGTG TGGACCCCGA CGCGGTCATG GAAGGCGTAG GCCGGGCCAT GCGCGTAGCC ATCTCGCGTG AGGAAGAAAA ACTCGAGCAG AGCCTGCCGT TCCTCGCCAC CGTTGGTTCG ACCAGCCCGT ACATCGGCCT GTTCGGTACC GTGTGGGGCA TCATGAACTC CTTCCGCGGC CTGGCCAGCG CCCAGCAGGC GACCCTGGCC ACCGTGGCTC CGGGTATCGC CGAAGCGCTG ATTGCGACCG CCATCGGCCT GTTCGCGGCA ATCCCCGCGG TTATCGCCTA CAACCGTTTC GCCGCACGCA GCGAAGTGCT GATCGGTCGT TACTACACCT TCGCCGACGA GTTCCAGGCG ATCCTGCACC GCAAAGTGCA CACCAGCGAA GAGTAA
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Protein sequence | MEANVVDHTS MWSLVSNASV VVQLVMLTLV AASVTSWIMI FQRSTMLRAG RRALDAFEER FWSGIDLSKL YRQAGSNPDP DSGVEQVFRA GFKEFSRLRQ QPGVDPDAVM EGVGRAMRVA ISREEEKLEQ SLPFLATVGS TSPYIGLFGT VWGIMNSFRG LASAQQATLA TVAPGIAEAL IATAIGLFAA IPAVIAYNRF AARSEVLIGR YYTFADEFQA ILHRKVHTSE E
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