Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3983 |
Symbol | |
ID | 6112948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4405511 |
End bp | 4406863 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641623773 |
Product | amino acid permease-associated region |
Protein accession | YP_001750832 |
Protein GI | 170723144 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCTG ACCACAGCGC CACCGGCAAC GGCCAACTCC GCAAAACCCT GCGCCTCTGG CACGTGATCA TCATCGGCCT GGCTTACCTG ACGCCGATGA CCGTGTTCGA CACTTTCGGC ATCGTCTCGG GGATTACCGC AGGGCATGTG CCCAGCGCCT ACATCCTGGC GCTGACCGGC ATCCTGTTCA CTGCCGTGAG CTACGGCACC CTGGTGCGCC GCTTCCCGCA ATCGGGGTCT GCCTATACCT ACACACAGCG CGCCATCAAC CCGCATGTGG GCTTTCTGGT CGGCTGGTCG TCGCTGCTCG ACTACCTGCT GCTGCCGATG GTCAATGCCT TGTTGGCCAA GCTCTACCTG TCGGCCATGT TCCCCGAAGT GCCGGAGTGG ATCTGGGTAG CGGGCTTCGT CACCCTGATC AGCCTGATCA ACATGCGCAG CGTCAACCTG GTGGCACACT TCAACCTGCT GTTCGTTGCC GTGCAGGTGG CGATCATCGC CGTGTTCATC TACCTGTGCG TACGTGGACT GGACCAGGGT GAAGGCTTGG GTACCGCGTG GAGCCTGCTG CCGTTCGCCG ACAGCCAGAC CCAGCTCAGC GCCCTGGCGG CCGGTGCGAC CATCCTGTGC TTCTCGTTCC TGGGCTTCGA CGCCGTGACG TGCCTGTCCG AGGAAACCCG CGACCCGGCC AAGACCATCC CACGGGCGAT CTTCCTGACC GCACTGATCG GCGGCCTGGT ATTCATTACC GTGTCGTACT TCATCCAGGC CTACTTCCCG ACCATGGCAC GCTTCCATGA CCAAGAAGCG GCCCTGCCGG AAATTGCCCT GTACGTGGGT GGCAAGCTTT TCCAGTCGAT CTTCATCGCC TGCACGGTGA TCAACACCAT CGCTTCGGGC CTGGCTTCGC AAACCAGCGT CTCGCGCCTG TTGTACGTGA TGGGACGTGA CAAGGTGATT CCCGCAGGCA TCTTTGCTCG CCTGCACCCG CGCTACAAAA CACCGGTGCT TAACATCGCA GTGGTCGGAC TGATTTCGCT GTCGGCGATC TTCTTCGATC TGGTTACCGC CACCTCGATC ATCAACTTCG GGGCACTGGT GGCGTTCAGC TTCGTCAACC TGTCGGTGAT CAACCACTGC TATCTGCGTG AAGGCAATCG CCAAGGGCTG GCGAACAAGC TCATGTACCT GATACTGCCG ACCATCGGTT TCTGCATCAT CGTGTCGCTG TGGCTAGACC TTAACGAGCA CTCGCTGATG TTCGGCGGGG TGTGGGCGCT ACTTGGCCTG GTGTACCTGG CCTGGCTGAC CAAGGCCTTC ACTGCCGCCC CCCCGAACTA CGTTGCCGAA TGA
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Protein sequence | MQPDHSATGN GQLRKTLRLW HVIIIGLAYL TPMTVFDTFG IVSGITAGHV PSAYILALTG ILFTAVSYGT LVRRFPQSGS AYTYTQRAIN PHVGFLVGWS SLLDYLLLPM VNALLAKLYL SAMFPEVPEW IWVAGFVTLI SLINMRSVNL VAHFNLLFVA VQVAIIAVFI YLCVRGLDQG EGLGTAWSLL PFADSQTQLS ALAAGATILC FSFLGFDAVT CLSEETRDPA KTIPRAIFLT ALIGGLVFIT VSYFIQAYFP TMARFHDQEA ALPEIALYVG GKLFQSIFIA CTVINTIASG LASQTSVSRL LYVMGRDKVI PAGIFARLHP RYKTPVLNIA VVGLISLSAI FFDLVTATSI INFGALVAFS FVNLSVINHC YLREGNRQGL ANKLMYLILP TIGFCIIVSL WLDLNEHSLM FGGVWALLGL VYLAWLTKAF TAAPPNYVAE
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