Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3982 |
Symbol | |
ID | 6112947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4403454 |
End bp | 4404962 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641623772 |
Product | hypothetical protein |
Protein accession | YP_001750831 |
Protein GI | 170723143 |
COG category | [S] Function unknown |
COG ID | [COG5339] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAAT CAGTAGGCAT CCTTTCCGGC CTGGCCATCG CCATTGCCGT CGTAACCACC GCTGGCGCCT GGTACACCGG CAAGCAGTTG CCTGCGCAGC TGGAGCAAGC CGTCAATCAG GGCAATGCCC AGTTGAAGAA GGCCCTTGTC GGGGTTGGCG GCAGCATGAC CATCGAAGTG GCCTCGCTGG AGCAGCACTT CTTCACCAGT ACCGCACGCT ATCGCCTCAA GGTCCGTGAC ATTCACCTGT CTGACGGTGA GCCGGTCAGT TTCGATGTGG GTGTAACCGA TCAGATCGAG CACGGCCCGT TCCCTTGGTC GCGGGTCAAG GCCCTCAAGC TGATGCCGGT GCTGGCAGCC AGCAACAGTG CGCTGGACAA GGACGACTTC ACCGCGCCCT GGTTCGCCGC CGCCGGCGAC AAGGTCCCGG TCAGCTCGCA AACCAGCCTG GGCTTTGACG GCAGTGTCGA TGGCAGCATC CTCCTGGCGC CGGTCAAGCT GGCCGAAGAC AACGGCACTA CCCTCGATTT TTCGGGTATG CAGCTGCAGA TCAGTGGCGA CAGTGAAGGC AAGGCGTCGA AATTCCATGG CGCTGCCGAT CGCTTCGAAA TGAAGTTGGT CGGGGATGAT CACCCGCCGG CCACGTTCGA GCTCAAGGAC CTGAAAATCG GCGGTAACCT GGCCGCTACC CAGCATGACG CAATCTATGT CGGTAACGTC GATGTGCTGC TGGCCGAAGC CAAGGCGACG CTGGGCCCCA AGCAGCAGGT ACTGCTGCTC AAAGGCCTGG AGCAGCACGT CCTGCAAACC CTCGATGGCC CCGATACCGT CGGTGGTCGC GTGGATTACA AGGTCGCGGA CATCAGCTGG GATGGCCGCG CAGTCGGTAG CGGGCAGATG GCGGTCAGCA TCAAGTCGCT CAACGCCCCG GCCTTGCAGT CGCTGTCGCA GTGGTACCAG GCCCATCTGC CGGAGTTCGA GCAGGCCGCT GCTGCTGGCC AGCCGATGCC CCAAATTCAG ATGGATGAAG CAGAGAAGGC CAAGTTCCAG GGCGACCTGA AGCAACTGTT GGCATCCAAG CCGCAGGTGG CGGTGGAGAA CCTTTCGTTC AAGACGGCCA ACGGCGAGAG CCGGTTCAAC CTGTCGATGG ACTTCGCCAG CCCCACCTCC TTCGACCTGC CGCCTGACCA GTTGAGCAAG CAGCTTATCA CTCAGGTGAA GAGCAAGCTG TCGCTGTCCA AACCGATGAT GGGTGACCTG GCGACCTTGC AGGCGTTGCT CGAAGGGCAG ACCGATGCCC AGGCGATTGC CATGCAATCC AGTCAGGCGG GTGAGATGGT CGGGATGATG GCGCTGCAGA GTGGCATGGC CACCGTGCAG GGCAATGACG TGGTGGCTAG CCTGCACTAC GTCGATGGCA TGGTCGACTT CAATGGCAAG AAGATGACCG TTGAAGAGTT CGCCATGATC CTCGCGGCGC ACTTTGCGGC GATGCAGCCG CAGGGCTGA
|
Protein sequence | MKKSVGILSG LAIAIAVVTT AGAWYTGKQL PAQLEQAVNQ GNAQLKKALV GVGGSMTIEV ASLEQHFFTS TARYRLKVRD IHLSDGEPVS FDVGVTDQIE HGPFPWSRVK ALKLMPVLAA SNSALDKDDF TAPWFAAAGD KVPVSSQTSL GFDGSVDGSI LLAPVKLAED NGTTLDFSGM QLQISGDSEG KASKFHGAAD RFEMKLVGDD HPPATFELKD LKIGGNLAAT QHDAIYVGNV DVLLAEAKAT LGPKQQVLLL KGLEQHVLQT LDGPDTVGGR VDYKVADISW DGRAVGSGQM AVSIKSLNAP ALQSLSQWYQ AHLPEFEQAA AAGQPMPQIQ MDEAEKAKFQ GDLKQLLASK PQVAVENLSF KTANGESRFN LSMDFASPTS FDLPPDQLSK QLITQVKSKL SLSKPMMGDL ATLQALLEGQ TDAQAIAMQS SQAGEMVGMM ALQSGMATVQ GNDVVASLHY VDGMVDFNGK KMTVEEFAMI LAAHFAAMQP QG
|
| |