| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3927 |
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| Symbol | |
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| ID | 6112891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4357067 |
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| End bp | 4363090 |
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| Gene Length | 6024 bp |
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| Protein Length | 2007 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641623716 |
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| Product | hypothetical protein |
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| Protein accession | YP_001750776 |
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| Protein GI | 170723088 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4733] Phage-related protein, tail component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.202078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCCAG CAGATCACCT GGAAATCACC GGCGCCAAGG GCGGCGAGAG CAAGCCGAAA
ACCCCCGTTG AGGCACCGGA CAGCCTGCAG TCGACGAACA TCGCCAAAAT CCTGTTGGCC
GTGGGCGAGG GCGAGTTCGA CGGCACGCCG ACCGATCGCG ACATTTACCT CGACAACACG
CCGATCATGG ACGCCAGCGG CAATGTGAAC TTCCCGGGTG TGAAGTGGGA GTGGCGCCGC
GGGAGCGTTG AGCAGGATTA CATCCAGGGC ATTCCCTCGA TCGAGAGCGA GAACACCGTC
AACGTTGAGC TGCGCAGTGA CAGCCCGTTC ACCCGCTCGC TGAGCAACAC GCAGCTATCT
GCGGTGCGCG TGCGTATGTC CTGGCCTCGC TTGGTCAGCC AAGACAGCAG TGGCAACACC
AACGGCTACC GCATCGAGTA CGCCATCGAT ATCGCCACTG ATGGCGGGGC GTACGTTGAA
GCGCACCTGG GTGCCGCCGA CGGTAAAACC ACGAACGGCT ACCAGCGCTC CGTGCGGGTC
AATCTGCCTA AAGCAACCAC CGGCTGGATG ATGCGCGTCC GCCGGATCAC CCCGAACGCC
AATAGCGGTA CCGTTGGCGA CACGATGACC ATTGCCGGCT ACACGGAGAT CATCGATCAG
AAACTCAGCT ATCCGAACAC CGCGCTGCTC TACATCGAGT TCGACGCCCA GCAGTTCCAG
AACATTCCGG CGGTGACCGT GGACTGCAAG GCCAAACTCT GGCCTGTGCC GACCAACTAC
GACCCGGGGA CCCGCACCTA CACCGGCGTG TGGGACGGCA CTTTCAAACA GGCCTGGACC
AACAACCCGG CGTTCGTGAC CTACGGCCTG TGCGTCGAGG ACCGCTTCGG CTTGGGCAAG
CGCATCAAGT CGTGGATGGT CGACAAGTGG GAGATGTACC GCATCGCCCA ATACTGCGAC
CAGCTGGTGC CGGACGGGAT TGGCGGGCAA GAGCCGCGCT ACCTGTGCGA CATGAACCTG
CAGGGCCGCG CTGAGGCCTG GACCCTGCTG CGCGACCTTT CGGCCATTTA CCGGGGCATG
GTGTACTGGG CCCATGGTTC GCTGTTCATG CAGGCGGACA TGCCGCGCGC CCAGGATATT
GACTACGTGT TCACCCGGGC CAACGTCATC GACGGCGACT TCGTCTATGG CGGCGCTGAG
CGCAACACCC ATTACAGCCG GGCGTTGGTC AGCTATGACA ACCCGGCGAA CAACTACGAC
ACCGATGTGA TTCCGGTAAC CGATCTAGCG CTCCAGCGCC GGTACCGGGA TCGCCCTGTA
GAAATCTCGG CCATTGGCTG CACCCGTGCC TCCGAGGCCC AGCGCCGAGG CAAGTGGGCG
CTGTTGAGCA ACAGTCAGGA TCGCACCGTC ACCTTCAAGA CCGGCATGGA AGGCCGGATT
CCGCTGCCTG GCTATGTCAT TCCCGTGGCT GACGAGCTGG TGGCAGGCCG TCCGAATGGT
GGCCGGATCT CGTCGGCCGC CGGCCGTGTG ATCACTTTGG ATCGTGACAC CCCGATTAAG
GCTGGCGATC GCCTGATCCT GAACTTGCCG AACGGCACTG CCCAGGCTCG CACCGTGCAA
TCTGTCGCCG GCCGAGCTGT GACCGTGACC ACCGAGTACG GCGTCCAGCC TGAACCCGAG
CTGCAGTGGG CAATCGACTA CGACGATCTG GCGGTTCAAC TGTTCCGCGT GCTGAAGACG
ACGCGCACCC AGGAGGGCGA ATACGAGATC ACTGCCCTTG AGTTCAACCC GAGCAAGTTC
GCGGCGATCG ACACGGGTGC CAAGCTGGAC GAACGCCCGA TCAGCGTCAT TCCCGTGACC
ACCGTTCAGC CTCCGGCCAG CGTGACCTTG TCGTCAGCCC ACATGATCGA CCAGGGAATT
GCGGTCAACA CCATGACCAT CGCCTGGCCT GCAGTGGAAG GGGCCGTCGC CTACGACGTC
GAGTGGCGCA AGGACAACGG CAACTGGATT CGCCTGCAAC GCACCGGCGC TGCTTCAGTT
GATGTGGTCG GTATCTACGC CGGCGCTTAC CTGGCGCGGG TACGGGCAGT CAGTGCCTTC
GACATCACGT CCATCTGGAA AAGTTCGACC CTGACTCAGC TGAACGGTAA GGAAGGCATA
CCGCCCTCGG TCACCTTCCT CAACACCGAA AGCCTGCTGT TCGGGATCAA GATCACTTGG
GGCTTCCCAG CTGGCGCAGA GGACACCCAG CGCACCGAGC TGTGGTACAG CGAGGGCACC
GACCTCGAGG AGGCCACCAA GCTGGCCGAT CTGGCATACC CGCAGCAGGA CTACGTCATG
CAGGGCCTGC GCGGCGGGCA GCGGTTCTTC TTCTGGGCGC GCCTGGTTGA CCGCACTGGC
AACGTCGGCC CGTTCTTCCC GGTCGCTCCG ACCGTTGTTA CCGGCGTTGC CAGCATGGAC
GCCGGCCCGA TCCTGGAGCA GATCAAGGAC CAGATCACCG AGAGCGAGCT GGGTCAGCAG
CTCACCGACC GCATCGACCT GATCGACAAG GAGGGCCCGG GCTCCGTCAA CGAGCGCCTG
GGTGAAGTTC GCAGCGACCT GAACCAGCAG ATCGTCGACG TCAACAACTC GCTGGGGCAA
GTGCAGTCCG AGTTGCAGCA GCAGATCGAC AGCATCGCCG ATCTGGCCGA CTCGATGCCG
TACAAGCCCG ACCAGGCCTA CACGGCTGGC CAAGGTACGT TGGGCGAAGA CGGCAAGCTG
TACCAGGCCA AGGTTGACGT CCCGGCCGGC AACCCGCCGC CGAACGCCAC CTACTGGACC
GACATTGGCC AGGCAGTGCA GACGGCAAAC GGTCTCGCCG CGCGCGTCGG TACCGTGGAG
ACCAGCGTCA CAGAGTTGAA CGGCGAGGTT GATGCCCAGG CCCAGCAGAT CGATGGCCTG
CGGACCAGCA TCGACGGGAA GGCTGACGCC TCGACGGTGA GTAGCCTGTC GAACCGTGTC
ACGCAGAACG AGCAGGGCCT TTCCAGCCAA GGCCAGGCCC TCACCGGCGT ACAGAACAGC
CTCAACACCA CCAACCAGAA CGTGACCGCA GCCCAGCAGG CCGCCCAAGC CGCTGCCGAT
GCTGCTGGCG CCAAGGGCAA GGTGCTGTAC CAGTCGACCG CGCCGGCAGT GGCGGACCGA
CTGGTGCAGA ATCTCTGGAT CGACACAACC GGCAATGCCA ACACGCCCAA ACGCTGGAAC
GGCAGCGCGT GGGTGGCCGT GACCGACAAG GTAGCGACGG AGGCAGCAGC TGCTGCCGCC
AGCGCACTGA GCCAGGTCGC TACCAAGGCT GATGCTTCGA CGGTGCAGGC CTTGAGCAAC
ACTGTGGACC AGCACGGTAC GGCGATCACA GCCAACGGCC AAGCGATCAC CAATATCAAC
ACGTCGCTCA GCCAGGTGGG CGGGGAGAAC CTGCTTTACA ACCCGTCGTT TGATAAAGCA
TCGGCTGCTA GCGCTAACGT CGCTGATGGG TGGTACTGGC GCACGCAAAC CGCCGTCGCT
GTAGTGCCGT CGCTTCTGCC ATCGGCCTTG GGAGCTGGCG GCAAACGGCA AAGACTGGAA
GTATCGGGGC TGATAGCCGG TACCGGCACT CACTACGTTG ATTTCGTGCC CGAGTCGGCT
CCTGCTGACT TCCGCCCCCC CGTCTATGAG GGGGTCGTAG GCACTGCATC TATCTATATC
CGTGGCAGCT CGGGGTTGAT GGTGCAGATC TACATGCAGT ACAAGGATGC GGCCGGGGTG
ACGATAGGTA CTCATGGCCC CGTCAACGTC AGCACCTCTC CCGTCGAGTC GTACAACCGC
ATCGTACTCA CCGGACTAGC CGCACCTGCG GGTTCGGTGC GAGTAGACAT TCTCTACCGG
ATCAGATCTG CTCCGGGGTC TAGTATCACG GCCGGTTTTG TTGACCTCGA TAAAGCACAA
TACGAACATA GTCCTGTTGT GACGGGCTGG CGCGACAATG GGCAGGTCAA TGCATCCGCT
ATCGCGGCTA ACGCCACTGC CACCACAGCA CTCACCGGCC GGGTAGGCCT CACGGAGCAA
GGCCTCACTA GCGTTTCGGG CAGCATCACC GAATTGAACA ACACAATTGG CGATGTTGGT
GGTGAGAACC TGTTCTACAA CCCCACTTTC AATGCTAACG GTTCCGGATC AGATATCGCC
GATGGCTGGG CCATGGAAGG TTCGGCCGTG AGTGTGGATT CCAGAGTCAC TTCTTGGCTC
AACTCCGGGG AGAAAGCAAT CCGAGTTGAG GTTTCAGGCG TGGGGAATGC AGGCCCCTAC
AAATCCGTGC GCCCCACTGG CGGAACGCCA GATCGAAGAC CCAAAGTAGC GGAAGGCCAG
ACCTTGACGG CGTCTGTTTA TCTTCGCGGT ACTGCCGGTT TGGGGTTTAG GTTCTTCCTC
CAATGGATCA ACGCTGCGGG TTCTTCGATA AGCGCACCGA ACTCGTTGAT GTTCACCGTC
ACACCCGGAG GTGAACGCGT TCAATACAGC GGCGTTGCAC CGGCCGGTGC CGTTAGTTGC
TACGTTTATC TCAGGATTTA TAGTGCTACT GGTGCCGTCA CATCAGGCCA TGTCGAAATG
GCCAGACCCC AATTCGAGTA CGGCACACGT GCTACAGGTT GGCGCGATAA CGGTCAGGTC
AATGCGGCGG CTACTTCGGC GGTTTCGACA GCGGTAGATA GCCTTGGCTC TACAGTGACC
CAGCAGGGCA ACAGCATCAC GAGCGTCTCT AACCGGACCA CATCGCTGGA GAACTCGGTC
AATAGCACGA CTAATGGACT CGCCACCAAG GCCTCGGCCT CGGCGGTGGA CGCGCTGACC
AACCGTGTTT CGGCAGCGGA GGGGGTCAAC ACCAGTCAGT CCAGCAGCAT CACCGAGCTC
AACAACAACG TTGGCGCAAT CCAAGATGCG CTGGGGGCCT CCGGTCTCGA TCCAGCACCC
AACTGTTTAT GGCAATTCGA TAGCACCACC GAAGGTTGGG TGGCTTCGGG CGCAACGCTG
GCACAGGGGG CTGGGTTCAT CAAAATCACT TCGACCGGTT CGGATCCGCA GCTGCACAGC
GGTACGGCGG CGACGTTGTC TATCACAGGC AGTCTCTACA GCCGCGTGCG GGCGCGCATC
ACCCGTCGGG CCGGTGCCGT TACGGACTGG GATGGCCAGT TGTTCTACCA GACCGCTGGT
CACGGGTTCT CGGGTAGCTA TCGAGCAATC GCGGCTAACC CGAACTTGGC AGTAGGACAA
TCGGCAGTGG TCGAGTGGGA CATGGCCAAC CTGGCAGCAG GCGGAACGGA CTGGGTGGAC
AGCACTATCA CTCGGCTTCG CTTGGACATG GGAGCTACAA GTGGCGGCGC TTTCGATGTG
GACTGGGTTG CCGTCGGCAG GGTTGCGCCA TCGGCCTCCA GTCGTGCAGT GGAGTCGTTG
ACCTCGACCG TGACTCAGCA AGGCGATGAT CTTAGCGCCC AGGCGCAACA GCTCACCGGC
CTCCAGACCT CGGTTGGTAG CAACTCGGCG TCGATCCAGC AGGTAGCCAA TGCCCAATCC
ACGCTCAACG GGAAGATCAA CGCGTCCTAC TCGGTGAAGC TCCAGGTCAC CGCTGGTGGA
CAGTACGTTG CTGCTGGCTT CGGTCTGGGC GTTGAGAACA GCGGGGGAGT GCTGCAATCG
ACATTTGCTG TGATGGCTGA TCGGTTCGCT GTGCTGAACC CATCGGGTAA CGGTTTTGTG
AGCCCATTCG CTATACAGAA TGGACAGGTA TTTATCAATG ATGCGCTCAT ATCGAGGCTA
TCAGTCCAAA ATGCGATTGT GGGATCGACC ATTTCTTCCT CTACGTTTAC GCAGTTTGGA
GAGCCGTTGA TGACTATAAA TTTCAATAGC GGTGAAATTA TTCTGCGTAA CTTTAGTCGG
AGCTCAACCT ACACAAAAAT AAATAACGAT GGCATTGACG TCGTTGTTGA TGGTGTACGC
CGGGTTCGTA TGGGCGTTTG GTAG
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| Protein sequence | MGPADHLEIT GAKGGESKPK TPVEAPDSLQ STNIAKILLA VGEGEFDGTP TDRDIYLDNT
PIMDASGNVN FPGVKWEWRR GSVEQDYIQG IPSIESENTV NVELRSDSPF TRSLSNTQLS
AVRVRMSWPR LVSQDSSGNT NGYRIEYAID IATDGGAYVE AHLGAADGKT TNGYQRSVRV
NLPKATTGWM MRVRRITPNA NSGTVGDTMT IAGYTEIIDQ KLSYPNTALL YIEFDAQQFQ
NIPAVTVDCK AKLWPVPTNY DPGTRTYTGV WDGTFKQAWT NNPAFVTYGL CVEDRFGLGK
RIKSWMVDKW EMYRIAQYCD QLVPDGIGGQ EPRYLCDMNL QGRAEAWTLL RDLSAIYRGM
VYWAHGSLFM QADMPRAQDI DYVFTRANVI DGDFVYGGAE RNTHYSRALV SYDNPANNYD
TDVIPVTDLA LQRRYRDRPV EISAIGCTRA SEAQRRGKWA LLSNSQDRTV TFKTGMEGRI
PLPGYVIPVA DELVAGRPNG GRISSAAGRV ITLDRDTPIK AGDRLILNLP NGTAQARTVQ
SVAGRAVTVT TEYGVQPEPE LQWAIDYDDL AVQLFRVLKT TRTQEGEYEI TALEFNPSKF
AAIDTGAKLD ERPISVIPVT TVQPPASVTL SSAHMIDQGI AVNTMTIAWP AVEGAVAYDV
EWRKDNGNWI RLQRTGAASV DVVGIYAGAY LARVRAVSAF DITSIWKSST LTQLNGKEGI
PPSVTFLNTE SLLFGIKITW GFPAGAEDTQ RTELWYSEGT DLEEATKLAD LAYPQQDYVM
QGLRGGQRFF FWARLVDRTG NVGPFFPVAP TVVTGVASMD AGPILEQIKD QITESELGQQ
LTDRIDLIDK EGPGSVNERL GEVRSDLNQQ IVDVNNSLGQ VQSELQQQID SIADLADSMP
YKPDQAYTAG QGTLGEDGKL YQAKVDVPAG NPPPNATYWT DIGQAVQTAN GLAARVGTVE
TSVTELNGEV DAQAQQIDGL RTSIDGKADA STVSSLSNRV TQNEQGLSSQ GQALTGVQNS
LNTTNQNVTA AQQAAQAAAD AAGAKGKVLY QSTAPAVADR LVQNLWIDTT GNANTPKRWN
GSAWVAVTDK VATEAAAAAA SALSQVATKA DASTVQALSN TVDQHGTAIT ANGQAITNIN
TSLSQVGGEN LLYNPSFDKA SAASANVADG WYWRTQTAVA VVPSLLPSAL GAGGKRQRLE
VSGLIAGTGT HYVDFVPESA PADFRPPVYE GVVGTASIYI RGSSGLMVQI YMQYKDAAGV
TIGTHGPVNV STSPVESYNR IVLTGLAAPA GSVRVDILYR IRSAPGSSIT AGFVDLDKAQ
YEHSPVVTGW RDNGQVNASA IAANATATTA LTGRVGLTEQ GLTSVSGSIT ELNNTIGDVG
GENLFYNPTF NANGSGSDIA DGWAMEGSAV SVDSRVTSWL NSGEKAIRVE VSGVGNAGPY
KSVRPTGGTP DRRPKVAEGQ TLTASVYLRG TAGLGFRFFL QWINAAGSSI SAPNSLMFTV
TPGGERVQYS GVAPAGAVSC YVYLRIYSAT GAVTSGHVEM ARPQFEYGTR ATGWRDNGQV
NAAATSAVST AVDSLGSTVT QQGNSITSVS NRTTSLENSV NSTTNGLATK ASASAVDALT
NRVSAAEGVN TSQSSSITEL NNNVGAIQDA LGASGLDPAP NCLWQFDSTT EGWVASGATL
AQGAGFIKIT STGSDPQLHS GTAATLSITG SLYSRVRARI TRRAGAVTDW DGQLFYQTAG
HGFSGSYRAI AANPNLAVGQ SAVVEWDMAN LAAGGTDWVD STITRLRLDM GATSGGAFDV
DWVAVGRVAP SASSRAVESL TSTVTQQGDD LSAQAQQLTG LQTSVGSNSA SIQQVANAQS
TLNGKINASY SVKLQVTAGG QYVAAGFGLG VENSGGVLQS TFAVMADRFA VLNPSGNGFV
SPFAIQNGQV FINDALISRL SVQNAIVGST ISSSTFTQFG EPLMTINFNS GEIILRNFSR
SSTYTKINND GIDVVVDGVR RVRMGVW
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