Gene PputW619_3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3907 
Symbol 
ID6112871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4340695 
End bp4341594 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content63% 
IMG OID641623696 
Producthypothetical protein 
Protein accessionYP_001750756 
Protein GI170723068 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTC ACTCTCGCCC CGATGTGTTG CGTGTGCTGT TCACCCTAAA GGGTTCGATT 
GTCAAACGCA TTGCCCTGCG CTGCCTGATG GTGACCTTGC TCGCCGCCCT GATCGTGCTG
GTCGAACGCC ACTTCCCGGC GTTTTTCTAC CCCGTCAGCG CTACCCCCTT CACGCTGCTT
GGCCTGTCGC TGTCGATCTT CATGAGTTTT CGCAACAATG CCTGTTACGA CCGTTGGTGG
GAGGGGCGCA AGGCCTGGGG GAAGATGATC ATCGAGACCC GCTCGTTCGT ACGTGAGAGC
GTGGTGATCA CCGATGAAGA GCTGCGCGCC GAGGTGCTGC GCAGCCTGTG CGGCTTTGCC
CATGCGCTCA ATGCCCGGTT GCGCAACGAG GATGATGTCG CCGCCGCCCG GCCGTGGCTG
GCCAACCCCG CTGCGATCCG CCCGCACAAT GTCTGCGACG GTATCTTGCA GGAAGTTGGC
GCCCGCTGCT CACGCCTGGC CGAGCAGCAG CAGATCAGCG ACTGGCGCTA CAGCCTGTTG
GAACAACGCC TGGTCGGGCT GTCAGAGGTG CAGGCCACCT GCGAGCGGAT CAAGGGCACA
CCGCTGCCCT TCCCCTATAC CCTGCTACTG CACCGGACCA TCTACATCTT TTGCCTGTTG
CTGCCGTTCG CGCTGGCCGA GCCGCTGGGC TGGCTGGCAC CGCTGTTTAC CACCATTGTG
GGGTACACCT TCTTTGGGCT GGATGCGATC GGCAATGAAC TGGAAGACCC GTTCGGACGA
GACGAGAACG ACCTGCCGAC CGATGCCATG GTGCGCACGG TCGAGCGGGA TGTGCTGGGG
GCCTTGGGCG TGGAGCCGCT GCCACCGGCG TTGCAGCCGG TGGAGCATGT GTTGAGCTGA
 
Protein sequence
MIVHSRPDVL RVLFTLKGSI VKRIALRCLM VTLLAALIVL VERHFPAFFY PVSATPFTLL 
GLSLSIFMSF RNNACYDRWW EGRKAWGKMI IETRSFVRES VVITDEELRA EVLRSLCGFA
HALNARLRNE DDVAAARPWL ANPAAIRPHN VCDGILQEVG ARCSRLAEQQ QISDWRYSLL
EQRLVGLSEV QATCERIKGT PLPFPYTLLL HRTIYIFCLL LPFALAEPLG WLAPLFTTIV
GYTFFGLDAI GNELEDPFGR DENDLPTDAM VRTVERDVLG ALGVEPLPPA LQPVEHVLS