Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3814 |
Symbol | |
ID | 6112778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4248142 |
End bp | 4249035 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641623605 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001750665 |
Protein GI | 170722977 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0217357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCTCGA CCTTGCCCGA CCTGAAACTG CTGCGCATCT TTGTCAGCGT GGTGCGCCAC CAAGGCTTCG CCAATGCCCA GCGCGATCTC AACCTGTCGA CCTCGGCCAT CAGTACCTAC ATGAGCCAGC TCGAAGGTGC CCTGGGCATC GTGCTGTGCC ACCGCGGGCG TGGCGGTTTC AGCCTGACCA GCAAGGGCGA GCTGTTCCAT CAGGAGACCT TGCGCCTGCT GGCAGAGCTC GATGGCTTCG AGCAATACGC CGCAGCGCTC AAGGGTGAGC TGCGCGGTAC GCTCAACCTC GGGGTGATTG ACTCGACCGT GGGCGACCGC GCGCTGCCTT TGGCTGAAGC GATCGGAGCC TACAGCCAGG AGCACCCCGC AGTGCACCTG CACCTTTCGG TATCCAGCCC CTATGAGCTG CAGCTTGGCG TGCAGGACAA CCGCCTGGAC CTGGCTATCG GGGCGTTCTC CTCGCGCATG AGTGGCCTGG TTTACCAGCC GCTGTACCGC GAGCAGCATT GGTTGTACTG CAGCAGTCGC CACCCTTTGT TCGCCGAGCG GCGTATCCCC GAACCGGTGG TGACCCAGCA GCGCATGGTC GGGCGCGGTT ACTGGAGCCA GGCGGAGTTG GCCCGGCATG GCTTCAAACA CAGCGCGGCG ACCGTCGAAA GCATGGAGGC GCAGCTCATT CTGATCCTGT CAGGTGCCTA TATCGGCTAC CTGCCCGAGC ACTATGCCCA GGCCTGGGTC GACAAGGGCG ACCTGCGCGT ATTGTCTCCG GCCACTTTCG GCTATCAGGC GCCATTTTCG CTGATCATCC GCCGCGGGCG CAGCCGTGAA CCCTTGATTC AGACCTTCCG CGACCTGCTC AAAAGCCAGC TCAATGTTGG CTGA
|
Protein sequence | MASTLPDLKL LRIFVSVVRH QGFANAQRDL NLSTSAISTY MSQLEGALGI VLCHRGRGGF SLTSKGELFH QETLRLLAEL DGFEQYAAAL KGELRGTLNL GVIDSTVGDR ALPLAEAIGA YSQEHPAVHL HLSVSSPYEL QLGVQDNRLD LAIGAFSSRM SGLVYQPLYR EQHWLYCSSR HPLFAERRIP EPVVTQQRMV GRGYWSQAEL ARHGFKHSAA TVESMEAQLI LILSGAYIGY LPEHYAQAWV DKGDLRVLSP ATFGYQAPFS LIIRRGRSRE PLIQTFRDLL KSQLNVG
|
| |