Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3805 |
Symbol | |
ID | 6112769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4229151 |
End bp | 4231295 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641623596 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_001750656 |
Protein GI | 170722968 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.824216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00000305051 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCGAAC AGGCTCAGCG CGTTCTCAAG GATATCTTCG GTTACGACAG TTTCCGTGGG CGCCAGGCAG CAATCATCGA ATGCGTGGCC AATGGCGGCG ATGCCCTGGT GCTGATGCCC ACCGGTGGCG GCAAGTCGCT GTGTTTTCAG GTACCGGGGC TGTTGCGCCC GGGCCTGACC GTGGTGGTGT CGCCGCTGAT CGCGCTGATG GACGATCAGG TCGCTACTCT CGATGAACTC GGGGTCGCGG CTGCGGCCCT GAACTCTACC CTCAGTGCGG AACAACAGCG TGATCTCGCC GGGCGCCTGC GCCGCGGTGA AGTGAAGATG CTTTACCTGG CGCCTGAGCG CCTGGTGCAG CCGCGGATGC TGGATTTCCT TCGCGGTCTG GACGTTTCCC TGTTCGCCAT CGACGAGGCC CACTGCGTTT CGCAATGGGG CCACGATTTC CGCCCGGAGT ACTTGCAACT GGGCCAGTTG GCCGAGCTGT TCCCGCATGT GCCGCGCATC GCCCTGACCG CCACCGCCGA CATGCGTACC CGCGAGGAAA TCGTCCAGCG CCTGCACCTG CAGGGCGCCG AACGCTTCCT GTCGAGCTTC GATCGGCCAA ATATCTTCTA CCGCATCGTG CCCAAGGAGT CGCCGCGCAA GCAGTTGATG GCCTTCCTCG GCGAGCGCCG CGGCAACGCC GGTATCGTCT ACTGCCTGTC ACGCAAGAAG GTCGATGAGA CCGCTGCCTA CCTGTGCGAC CAAGGCTTCC CGGCGTTGCC GTACCACGCC GGCCTGGCTG CTGAAACCCG TTCGGCCAAC CAGCACCGCT TCCTCAACGA GGAAGGGCTG ATCATGGTCG CCACCATCGC CTTCGGCATG GGCATCGACA AGCCCAACGT ACGCTTCGTC GCCCACCTCG ACCTGCCCAA GTCGCTCGAG GCCTATTACC AGGAGACGGG GCGTGCCGGC CGCGATGGCC TGCCGTCCGA TGCCTGGATG GCCTACGGCC TGCAGGACAT GGTGATGCTC AAACAGATGC TGCAGAACTC CGATGGGGAC GAGCGCCACA AGCGCGTTGA GCAACACAAG CTCGACGCCA TGCTTGCACT GTGCGAGGAA ACCCGTTGTC GCCGCCAGGC GTTGCTGGCC TATTTCGATG AAGTACTCGA ACAGCCCTGC GGGCATTGCG ACAACTGCGT CGACCAGATC CAGACCTGGG ATGCCACCGA GCCTGCGCGC CAGGCCCTGT CGGCGGTGTT CCGTACCGGC CAGCGTTACG GTGTCGGCCA CCTGATCGAT GTGCTGCTGG GCAAGGATAC CGAGAAGGTG CGCAATTTCG GTCACGAGAA ACTCTCGGTG TTTGGTGTTG GCAAGGCGAT GGCCGAGGTT GAATGGCGTT CGCTGTTCCG CCAGTTGGTG GCGCGCGGCC TGGTCGACAT CGATCTGGAA GGCTACGGTG GCCTGCGCCT GTCCGACAGC TGCAGGCCGC TGCTGCGCGG CGAAGTGACC TTACAGTTGC GTCGCGACCT CAAGCCGCAG ACAGTGGCTA AAACGGCCTC CGGCGGCGGC AGCCCGGCCA GCCAGCTGGT GCGCGCCGAA GAGCGCGAAC TGTGGGAAGC GCTGCGCACG TTGCGTCGCA AACTGGCCGA AGAGCACAGC GTGCCGCCTT ATGTCATCTT CCCGGACTCC ACGCTGCTGG AGATGCTGCG CAGCCAGCCG GCCAGCCTCA GCGACATGGC TCAGGTCAGC GGCGTGGGGG CGCGCAAGCT GGAGCGCTAC GGCCAGGCCT TCCTCGAAGT GCTCAATGAC GCCGGTGGCA CCACCGAGGC GCCCAAGGTG GTACTCGATC TGCGCCACGA ACTGGTCAGC CTGGCCCGTG CCGGCATGAC CCCGGCGCAA ATCGCCGGCC AGCTCAATTG CAGCGAAAAG AACGTCTACA GCCTGCTGGC CGAGGCTATT GGTCGCCAGG AACTGAGCCT GGACCAGGCA CTGGACCTGC CTGAAGACTT GATGATGGAA GTGCAGGATG CCTTCCTTGA TGGCGAAGGC GAGCTGCCAC CTGTCTCGGC CATTGCTCCG CTGTTCGGCG CGCGCATACC CGAGGGTGTG CTGTACTGCG TGCGCGCTGC GCTGGCTGCG GAATTTGAGC TTTGA
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Protein sequence | MLEQAQRVLK DIFGYDSFRG RQAAIIECVA NGGDALVLMP TGGGKSLCFQ VPGLLRPGLT VVVSPLIALM DDQVATLDEL GVAAAALNST LSAEQQRDLA GRLRRGEVKM LYLAPERLVQ PRMLDFLRGL DVSLFAIDEA HCVSQWGHDF RPEYLQLGQL AELFPHVPRI ALTATADMRT REEIVQRLHL QGAERFLSSF DRPNIFYRIV PKESPRKQLM AFLGERRGNA GIVYCLSRKK VDETAAYLCD QGFPALPYHA GLAAETRSAN QHRFLNEEGL IMVATIAFGM GIDKPNVRFV AHLDLPKSLE AYYQETGRAG RDGLPSDAWM AYGLQDMVML KQMLQNSDGD ERHKRVEQHK LDAMLALCEE TRCRRQALLA YFDEVLEQPC GHCDNCVDQI QTWDATEPAR QALSAVFRTG QRYGVGHLID VLLGKDTEKV RNFGHEKLSV FGVGKAMAEV EWRSLFRQLV ARGLVDIDLE GYGGLRLSDS CRPLLRGEVT LQLRRDLKPQ TVAKTASGGG SPASQLVRAE ERELWEALRT LRRKLAEEHS VPPYVIFPDS TLLEMLRSQP ASLSDMAQVS GVGARKLERY GQAFLEVLND AGGTTEAPKV VLDLRHELVS LARAGMTPAQ IAGQLNCSEK NVYSLLAEAI GRQELSLDQA LDLPEDLMME VQDAFLDGEG ELPPVSAIAP LFGARIPEGV LYCVRAALAA EFEL
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