Gene PputW619_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3804 
Symbol 
ID6112768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4228572 
End bp4229009 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content61% 
IMG OID641623595 
ProductMarR family transcriptional regulator 
Protein accessionYP_001750655 
Protein GI170722967 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.279751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000113316 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCCTGA CCGACAACCA ACACCGTTTC GGCATGCAGC TGGCCCAGAT GTCCCGTGGC 
TGGCGTGCCG AACTGGATCG CCGCCTGGCC GGGCTCAACC TGTCCCAGGC GCGCTGGCTG
GTGTTGCTGC ACCTGGCTCG TTTTGAAGAA GCGCCGACCC AGCGCGAGCT GGCGCAAAGT
GTAGGCGTTG AAGGCCCGAC CTTGGCGCGT CTGCTAGACA GCCTGGAAAG CCAGGGCCTG
GTTCGACGCC AGGCGGTGCT TGAGGACCGG CGGGCGAAGA AAATCCAGTT GTGTCCTCCG
GCCAAGCCGC TGATCGAGCA GATCGAAACT ATCGCCAATG CCTTGCGCCT GGAATTGTTC
ACCGGAGTTG ATGAGGCTGA CCTGGATGTG TGCATGCGGG TGCATGCGAA AATTTTGGCC
AACCTGGAAA AATCCTGA
 
Protein sequence
MPLTDNQHRF GMQLAQMSRG WRAELDRRLA GLNLSQARWL VLLHLARFEE APTQRELAQS 
VGVEGPTLAR LLDSLESQGL VRRQAVLEDR RAKKIQLCPP AKPLIEQIET IANALRLELF
TGVDEADLDV CMRVHAKILA NLEKS