Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3803 |
Symbol | |
ID | 6112767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4226367 |
End bp | 4228550 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641623594 |
Product | patatin |
Protein accession | YP_001750654 |
Protein GI | 170722966 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.799265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00000293733 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCCGCC TGCTGTTCTG CCTTTTACTG ACGCTCAGCT CATTCACCGT GCTCGCCGAG GCGGCACGCC CCAAGGTCGG CCTGGTACTC TCCGGGGGCG CCGCCCGTGG CCTGGCCCAC ATCGGCGTAC TCAAGGCCCT GGAGGAACAG GGCGTGCGCA TCGACGCCAT CGCCGGCACC AGCATGGGCG CAGTGGTTGG CGGCCTGTAT GCATCCGGCT ACAGCATCGA TGAGCTGGAA AAGCTCGCCA CCACGCTCGA CTGGCAGCAG GCGTTGTCAG ATGCTCCACC GCGCAAGGAC GTGCCTTTCC GGCGCAAGCA GGATGACCGT GACTTTCTGG TCAAGCAGAA GCTGAGTTTT CGAGACGACG GCAGCCTCGG CCTGCCACTG GGGGTGATTC AGGGCCAGAA CCTCGCACTG CTGCTGGAAA GCAAGCTGGC CCACACAGCC GATACCCGCG ATTTCGACAA GTTGCCGATA CCGTTCCGCG CCGTGGCAAC CGACATCGCC AGCGGCGAGA AGGTGGTATT CCGCCGCGGC CACCTACCCC AAGTGATCCG CGCCAGCATG TCGATCCCGG CGGTCTTCGC CCCGGTCGAG CTTGATGGGC GCCTGCTGGT GGATGGCGGC ATGGTCGACA ACATACCCGT GGATGTGGCC CGGGACATGG GCGTTGATCT GGCCATCGTC GTCGATATCG GCACCCCGCT GCGTGACCGC AAGCAACTGG CCACGGTGGT GGATGTACTC AACCAGTCGA TCACCCTGAT GACCCGGCGC AACTCCGAAG AACAACTGGC CAGTTTGCAT AGGGATGACA TCCTCATCCA GCCACAGCTG GCCGCGTTCG GCGTCACCGA CTTTGGCCGC GCGCGCGACA TGATCGAGGC CGGCTACCGT GCAACCCGCC TGCTCGACCC TCGCCTGGCT GCCCTGCGCC AGCCTGAAGG CGATGCCGAA CTGGCCATGG CACGCTCACC GCGCCAGCGC ACCCCGATGA TCACCGCCAT CAAGGTGGAG AACGATTCCA AGGTCAGCGA TGACGTGATC CGCTATTACA TCCGCCAGCC GATCGGCGAG CCGCTGGAAC TCGACCGCCT GCAAACCGAC ATGGGCACCC TGTATGGCCT GGACTACTTC GACCGTGTGC AATACCGCGT GGTCCATAAA GGCAACGACA ACACTTTAGT GATCAACGCC CGTGGCAAGC GCGGCGGCAC CGATTACCTG CGCCTGGGCC TGAACCTGTC GGACGACCTG CGCGGGGACA GCGCCTTCAA CCTGGGCGCC AGCTATCGGG TCAATGGTAT CAACCAGTTG GGCGCCGAGT GGCTGACGCG CGCGCAGATC GGTGACAAGC AGGAGCTCTA CAGCGAGTTC TACCAGCCGC TTGACGTGGG TTCACGCTAT TTCATCGCAC CTTATCTGGA CTTCGGCTCA CAGAACATCG AAGCCACCCT GGATAGCGAT CCGGTAGCCG AATACCGTCT CGAGCGCTAT GGCTTCGGCC TCAACGTCGG CCGCCAGATC GGCACCTATG GCGAAGTGCG CCTGGGTGCG GGCAAGGCCT GGGGCGAGGC CGAGGTGCGC ATTGGTGAAC AGGACCTGCC CAAGGTCAGT TTCAACGAAG GTTTCTACGA GCTGAAATAC TCGTTCGACA CGCTCGACAA TGTGTACTTC CCGCACAGTG GCGAGAATAT AGGCCTGACC CTGCGCAAAT ACGACAAATC GCTGGACTCG GACGCGGACT ATCGCCAGTG GATGTTCAAT CTGGACAAGG CTTTGAGCAG CGGGCCGAAC ACGCTGGTGC TCGGTGGTGG GTATGGACGC ACGCTCGACG ACACCGAAGT CGTGACGTCG AGCTTTGTGC TTGGCGGGGC GCGCCAACTG TCCGGGTTCC GCCAGGACTC GGTATCAGGG CAGAACGTGA GCCTGCTGCG CATGGTCTAT TACCGCCGCC TCACGCCGCG TTCCTATCTG CCGCTGGACT TCCCGCTTTA CATAGGCGGG TCACTGGAGC GCGGACGGGC GTGGAACAAC GACAACGAGT TCGACAGTGG CTACATCAAT GCCGCCAGTA TCTTCCTGGG CCTAGACACG CCACTCGGGC CGTTGAGCCT CAGCTATGGA GCCAACAGTG CGGATGAGCA GGCAATCTAC TTGAACCTGG GGAATACATT CTGA
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Protein sequence | MRRLLFCLLL TLSSFTVLAE AARPKVGLVL SGGAARGLAH IGVLKALEEQ GVRIDAIAGT SMGAVVGGLY ASGYSIDELE KLATTLDWQQ ALSDAPPRKD VPFRRKQDDR DFLVKQKLSF RDDGSLGLPL GVIQGQNLAL LLESKLAHTA DTRDFDKLPI PFRAVATDIA SGEKVVFRRG HLPQVIRASM SIPAVFAPVE LDGRLLVDGG MVDNIPVDVA RDMGVDLAIV VDIGTPLRDR KQLATVVDVL NQSITLMTRR NSEEQLASLH RDDILIQPQL AAFGVTDFGR ARDMIEAGYR ATRLLDPRLA ALRQPEGDAE LAMARSPRQR TPMITAIKVE NDSKVSDDVI RYYIRQPIGE PLELDRLQTD MGTLYGLDYF DRVQYRVVHK GNDNTLVINA RGKRGGTDYL RLGLNLSDDL RGDSAFNLGA SYRVNGINQL GAEWLTRAQI GDKQELYSEF YQPLDVGSRY FIAPYLDFGS QNIEATLDSD PVAEYRLERY GFGLNVGRQI GTYGEVRLGA GKAWGEAEVR IGEQDLPKVS FNEGFYELKY SFDTLDNVYF PHSGENIGLT LRKYDKSLDS DADYRQWMFN LDKALSSGPN TLVLGGGYGR TLDDTEVVTS SFVLGGARQL SGFRQDSVSG QNVSLLRMVY YRRLTPRSYL PLDFPLYIGG SLERGRAWNN DNEFDSGYIN AASIFLGLDT PLGPLSLSYG ANSADEQAIY LNLGNTF
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