Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3763 |
Symbol | alaS |
ID | 6112727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4182212 |
End bp | 4184905 |
Gene Length | 2694 bp |
Protein Length | 897 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641623554 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001750614 |
Protein GI | 170722926 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.469111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.276016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCCCT TTGCCGTCGT TTCGTCGACG CGTTTGCCCC CAGGGGCCGC CGTTTCCGTG GAAGAACCTA TGAAAAGCGC AGAAATCCGT GAAGCCTTCC TTCGCTTCTT CGAAGAGCAG GGCCATACCC GAGTCGCCTC CAGTTCGCTG ATCCCGAACA ACGACCCGAC CCTGCTGTTC ACCAACGCAG GCATGAACCA GTTCAAGGAC TGCTTCCTCG GTGCCGAGAA GCGCGCCTAC ACCCGTGCGG TCAGCAGCCA GAAGTGCGTG CGCGCCGGCG GCAAGCATAA CGACCTGGAA AACGTCGGTT ACACCGCGCG TCACCACACC TTCTTCGAGA TGCTGGGCAA CTTCAGCTTC GGCGACTATT TCAAGCGCGA TGCGATCACT TTCGCCTGGA CCTTCCTGAC TTCCGACAAG TGGCTGAACC TGCCCAAGGA AAAGCTCTGG GTCACCGTCT ACGCCAGCGA CGACGAAGCC TACGACATCT GGACCAAGGA AGTCGGCGTG CCGGCCGAGC GCATGGTGCG CATCGGTGAC AACAAAGGCG CCCCTTACGC CTCCGACAAC TTCTGGACCA TGGGCGACAC CGGCCCGTGT GGCCCTTGCA CCGAGATCTT CTACGACCAC GGTGCCGATA TCTGGGGCGG CCCACCCGGT TCCCCTGAAG AAGACGGCGA CCGCTACATC GAGATCTGGA ACAACGTCTT CATGCAGTTC AACCGCACTG CCGATGGCGT GCTGCACCCG CTGCCAGCGC CGTCGGTGGA TACCGGCATG GGCCTGGAGC GCATCAGTGC GGTCATGCAG CACGTGCACT CGAACTACGA GATCGACCTG TTCCAGAACC TGCTGAGCGC TGCGGCCAAG GCCATCGGCT GCAGCAACGA CGGTCAGGCT TCGCTGAAAG TCGTGGCCGA CCACATCCGC TCTTGCGGCT TCCTGATCGC AGACGGCGTG CTGCCCTCCA ACGAAGGCCG TGGCTACGTG CTGCGCCGCA TCATTCGTCG TGCCTGCCGT CACGGTAACA AGCTGGGCGC CAAGGGCAGC TTCTTCTACC AGATCGTCGC CGCCTTGGCT GCCGAGATGG GCGAGGCGTT CCCGGAGCTC AAGAGCCAGC AAGCGCACAT CGAGCGCGTG CTCAAGGCCG AAGAAGAACA GTTCGCCAAG ACCCTCGAGC AGGGCCTGCG CATCCTCGAG CAGGATCTGG CCCAGCTCAA GGGCGACGTA GTGCCGGGTG ACGTGGTGTT CAAGCTGTAC GACACCTACG GCTTCCCGAT GGACCTGACC GCCGACATCG CCCGCGAGCG CGAGCTGACC ATCGATGAAG CGGGCTTCGA GCGTGAAATG GATGCCCAGC GTGAGCGCGC CCGTTCCGCC AGTGCCTTCG GCATGGATTA CAACAGCCTG GTCAAGGTCG ACACCGCTAC CGACTTCGTC GGCTACAACG CCACCGAAGG TCAGGGCAAG GTCATTGCCC TGTACAAGGA CGGCCAGTCG GTCGACCAGT TGGGCGAGGG CGAGCAGGGC GTCGTGGTGC TGGACCGCAC CCCGTTCTAT GCCGAGTCCG GTGGCCAGGT TGGTGACACC GGCTACCTGC AGTCGGGCGC CGTACGCTTT GACGTGCAGG ACACCACCAA GACCGGCGGC GCTTTCCTGC ACCATGGCGT GGTCGCCAGC GGCGCGCTGG TGATCGGTTC TCCGGTCGAA GCCAAGGTCG ATGCCGACGT GCAGCACGCC ACCTCGCTGA ACCACTCGGC CACGCACCTG CTGCACGAAG CGCTGCGTCA GGTACTGGGC GAGCACGTGC AGCAGAAGGG CTCGCTGGTC GACAGCCAGC GTCTGCGTTT CGACTTCAGC CACTTCGAGG CGGTGACGCC TGCGCAGATC AAGGCACTGG AAGACATCGT CAACCGCGAA GTGCGCAAGA ACACCCCGGT GGAAACTGAA ATCACCGATA TCGAAACCGC CAAGCGCAAA GGCGCGATGG CCCTGTTTGG CGAGAAATAC GGCGATACCG TGCGCGTGCT GAGCATGGGT GGCGATTTCT CCGTCGAGCT GTGCGGCGGG ATCCACGCCA AGCGCACCGG CGATATCAGC CTGTTCAAGA TCATCAGCGA AGGTGGCGTG GCCTCTGGCG TGCGCCGTAT CGAAGCGGTT ACCGGCGCTG CCGCGCTGGC TTACCTGAAC GCTGCCGAAG AGCAGGTCAA GGAAGCCGCG CAGCTGATCA AGGGCAACCG TGACAACCTG ATCGACAAGC TGTCGGCTGT GCTCGAGCGC AACCGTCAGC TGGAGAAGCA GCTGGAACAG CTGCAGGCCA AGGCCGCCAG CGCCGCAGGG GACGATCTCT CCAGTGCGGC TGTTGAGGTC AAGGGTGCCA AGGTCCTCGC CGCCCGCCTG GATGGGCAGG ATGGCAAGGC CCTGCTGGCC CTGGTTGATC AGCTGAAGAA CAAGCTCGGC CACGCAGTGA TCCTGCTGGG CAGCGAGCAT GAGGGCAAGG TCGTGCTGGT GGCCGGCGTG ACCAAAGACC TCTCCAGCCA ACTCAAGGCT GGTGACCTGA TGAAACAAGC CGCTGCGGCA GTGGGCGGCA AGGGCGGTGG CCGTCCGGAC ATGGCTCAAG GCGGTGGCGT CGACGTCGCT GCACTGGACC AGGCCCTGGC GCTGGCCGTG CCGTTCGCAG AGCAGGGACT TTGA
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Protein sequence | MRPFAVVSST RLPPGAAVSV EEPMKSAEIR EAFLRFFEEQ GHTRVASSSL IPNNDPTLLF TNAGMNQFKD CFLGAEKRAY TRAVSSQKCV RAGGKHNDLE NVGYTARHHT FFEMLGNFSF GDYFKRDAIT FAWTFLTSDK WLNLPKEKLW VTVYASDDEA YDIWTKEVGV PAERMVRIGD NKGAPYASDN FWTMGDTGPC GPCTEIFYDH GADIWGGPPG SPEEDGDRYI EIWNNVFMQF NRTADGVLHP LPAPSVDTGM GLERISAVMQ HVHSNYEIDL FQNLLSAAAK AIGCSNDGQA SLKVVADHIR SCGFLIADGV LPSNEGRGYV LRRIIRRACR HGNKLGAKGS FFYQIVAALA AEMGEAFPEL KSQQAHIERV LKAEEEQFAK TLEQGLRILE QDLAQLKGDV VPGDVVFKLY DTYGFPMDLT ADIARERELT IDEAGFEREM DAQRERARSA SAFGMDYNSL VKVDTATDFV GYNATEGQGK VIALYKDGQS VDQLGEGEQG VVVLDRTPFY AESGGQVGDT GYLQSGAVRF DVQDTTKTGG AFLHHGVVAS GALVIGSPVE AKVDADVQHA TSLNHSATHL LHEALRQVLG EHVQQKGSLV DSQRLRFDFS HFEAVTPAQI KALEDIVNRE VRKNTPVETE ITDIETAKRK GAMALFGEKY GDTVRVLSMG GDFSVELCGG IHAKRTGDIS LFKIISEGGV ASGVRRIEAV TGAAALAYLN AAEEQVKEAA QLIKGNRDNL IDKLSAVLER NRQLEKQLEQ LQAKAASAAG DDLSSAAVEV KGAKVLAARL DGQDGKALLA LVDQLKNKLG HAVILLGSEH EGKVVLVAGV TKDLSSQLKA GDLMKQAAAA VGGKGGGRPD MAQGGGVDVA ALDQALALAV PFAEQGL
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