Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3744 |
Symbol | |
ID | 6112703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4162693 |
End bp | 4163955 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641623530 |
Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
Protein accession | YP_001750595 |
Protein GI | 170722907 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.566089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCACGC ACGTCATCAA GATGCCGGAC ATTGGCGAAG GCATCGCGCA AGTCGAGCTG GTCGAATGGT TCGTCAAGGT CGGCGATGTG ATCGCCGAAG ACCAGGTGGT GGCCGATGTC ATGACTGACA AGGCCACCGT GGAAATCCCT TCGCCGGTCA GCGGCAAGGT GCTGGCCCTG GGCGGCCAGC CGGGTGAAGT GATGGCGGTC GGCAGCGAGC TGATCCGCAT CGAAGTGGAA GGCAGCGGCA ACCATGTCGA TGTGCCGCAG GCCAAGCCGG TAGAAGCCCC GGCAGCCGCC AAGGCAGAAC CGCGTGTCGA ACCGCAACCG GTAGCCAGCC CGGCTGTCTC GGCGCACACC GCCGCGCCGA TCGTGGCGCG CCAGGCCGAC GAAAAACCTC TGGCCTCGCC TGCCGTGCGC AAGCGCGCCC TGGATGCCGG CATCGAACTG CGTTACGTGC ATGGCAGCGG CCCGGCCGGG CGCATCCTGC ACGAAGACCT GGATGCATTC ATCAGCAAGC CGCAGAGCCC TGCGAGCCAG GCGCCGGGCG GCTACGCGAA ACGCACCGAC AGCGAACAGG TGCAAGTGAT CGGCCTGCGC CGCAAGATCG CCCAGCGCAT GCAGGATGCC AAGCGCCGTG TGGCGCACTT CAGTTATGTC GAGGAAATCG ATGTTACTGC ACTCGAAGCC CTGCGCCAGC AGCTCAACAG CAAGCACGGC GATAGCCGCG GCAAACTGAC CCTGCTGCCA TTCCTGGTCC GCGCCCTGGT CGTGGCACTG CGCGACTTCC CGCAGATCAA CGCGACCTAC GACGACGAAG CCCAGGTCAT CACCCGCCAT GGCGCGGTAC ATGTGGGGAT CGCCACACAG GGCGACAACG GGCTGATGGT ACCGGTGCTG CGCCACGCCG AAGCGGGCAG CCTGTGGGGC AATGCCAGCG AGATTTCCCG ACTGGCGAGC GCCGCACGTA ACAACAAGGC CAGCCGCGAG GAACTGTCCG GCTCCACCAT CACCCTGACC AGCCTCGGCG CCCTGGGTGG CATCGTCAGC ACGCCGGTGG TCAACACGCC GGAAGTGGCG ATCGTCGGGG TCAACCGTAT CGTCGAGCGG CCGATGGTGA TCGATGGCCA GATCGTTATT CGCAAGATGA TGAACCTGTC CAGCTCGTTC GACCACCGTG TGGTCGATGG CATGGATGCC GCGCTGTTCA TACAGGCTGT ACGTGGCCTG CTTGAACAAC CCGCCTGCCT GTTCGTGGAG TGA
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Protein sequence | MGTHVIKMPD IGEGIAQVEL VEWFVKVGDV IAEDQVVADV MTDKATVEIP SPVSGKVLAL GGQPGEVMAV GSELIRIEVE GSGNHVDVPQ AKPVEAPAAA KAEPRVEPQP VASPAVSAHT AAPIVARQAD EKPLASPAVR KRALDAGIEL RYVHGSGPAG RILHEDLDAF ISKPQSPASQ APGGYAKRTD SEQVQVIGLR RKIAQRMQDA KRRVAHFSYV EEIDVTALEA LRQQLNSKHG DSRGKLTLLP FLVRALVVAL RDFPQINATY DDEAQVITRH GAVHVGIATQ GDNGLMVPVL RHAEAGSLWG NASEISRLAS AARNNKASRE ELSGSTITLT SLGALGGIVS TPVVNTPEVA IVGVNRIVER PMVIDGQIVI RKMMNLSSSF DHRVVDGMDA ALFIQAVRGL LEQPACLFVE
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