| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3698 |
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| Symbol | |
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| ID | 6112657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4112973 |
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| End bp | 4114448 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623484 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001750549 |
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| Protein GI | 170722861 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.288124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCGTG AAACCAAGAT TCTCCTGATC GATGACGACA GCGCCCGCCG CCGCGATCTG
GCAGTGGTTC TGAACTTCCT CGGCGAAGAA AACCTGCCCT GCTCCAGCCA GGATTGGCAG
CAGGTGGTGG GGGCATTGTC TTCCAGCCGT GAAGTGCTCT GCGTGCTCAT CGGAACCGTG
GATGCTCCAG GCAATGTGCT TGGGTTGCTT AAGACAGTGG CCGGGTGGGA TGAGTTCCTT
CCGGTATTGC TGATCGGCGA AATTTCTTCT GCGGATTTCC CCGAAGAGCT CCGCCGTCGC
GTGCTGGCCA ACCTTGAGAT GCCGCCCAGC TATAGCCAGC TGCTCGACTC CCTGCACCGT
GCCCAGGTCT ATCGCGAGAT GTACGACCAG GCCCGTGAGC GTGGCCGTCA GCGCGAGCCC
AACCTGTTCC GCAGCCTGGT GGGCACCAGC CGCGCCATCC AGCATGTTCG GCAGATGATG
CAGCAGGTCG CCGATACCGA CGCCAGCGTG CTCATTCTTG GTGAGTCCGG TACTGGCAAG
GAGGTGGTCG CGCGCAACCT GCATTACCAC TCCAAACGCC GCGAAGCGCC GTTCGTGCCG
GTCAATTGCG GGGCGATCCC GGCCGAATTG CTGGAAAGCG AACTGTTCGG CCACGAGAAG
GGTGCGTTCA CGGGCGCCAT CACCAGCCGT GCCGGGCGTT TCGAGCTGGC CAATGGCGGT
ACGCTGTTCC TTGACGAGAT CGGCGACATG CCGCTGCCGA TGCAGGTCAA GCTGTTGCGT
GTGCTGCAGG AGCGTACCTT CGAGCGGGTG GGCAGCAACA AGACCCAGAG CATCGATGTG
CGCATCATCG CCGCAACCCA CAAGAACCTC GAGACCATGA TCGAGGGTGG GACCTTCCGC
GAAGACCTGT ACTACCGCCT CAACGTGTTC CCGATCGAGA TGGCGCCGTT GCGTGAGCGT
GTGGAAGACA TTCCGCTGCT GATGAACGAG CTGATTTCGC GCATGGAGCA TGAGAAGCGC
GGCTCGATAC GCTTCAATTC TGCATCGATC ATGTCGCTGT GCCGGCATGG CTGGCCGGGC
AACGTCCGCG AGCTGGCCAA CCTGGTCGAG CGCATGGCGA TCATGCACCC GTACGGCGTG
ATTGGCGTGT CGGAGCTGCC GAAGAAATTC CGCTACATCG ACGATGAAGA CGAGCAGTTG
GTCGACAGCC TGCGCAGCGA CCTCGAAGAG CGCGTGGCGA TCAACGGCCA CGCGCCGAGC
TTCGCCAACC ATGCCATGCT GCCGCCTGAG GGCCTGGACC TGAAGGATTA CCTGGGCAGC
CTGGAGCAGG GGTTGATCCA GCAAGCGCTG GACGATGCCA ACGGTATCGT GGCGCGGGCG
GCTGAACGTT TGCGCATTCG GCGTACCACC TTGGTGGAGA AGATGCGCAA GTACGGCATG
AGCCGCCAGG GCGGTGAGGA GCAGGCTGAA GATTGA
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| Protein sequence | MWRETKILLI DDDSARRRDL AVVLNFLGEE NLPCSSQDWQ QVVGALSSSR EVLCVLIGTV
DAPGNVLGLL KTVAGWDEFL PVLLIGEISS ADFPEELRRR VLANLEMPPS YSQLLDSLHR
AQVYREMYDQ ARERGRQREP NLFRSLVGTS RAIQHVRQMM QQVADTDASV LILGESGTGK
EVVARNLHYH SKRREAPFVP VNCGAIPAEL LESELFGHEK GAFTGAITSR AGRFELANGG
TLFLDEIGDM PLPMQVKLLR VLQERTFERV GSNKTQSIDV RIIAATHKNL ETMIEGGTFR
EDLYYRLNVF PIEMAPLRER VEDIPLLMNE LISRMEHEKR GSIRFNSASI MSLCRHGWPG
NVRELANLVE RMAIMHPYGV IGVSELPKKF RYIDDEDEQL VDSLRSDLEE RVAINGHAPS
FANHAMLPPE GLDLKDYLGS LEQGLIQQAL DDANGIVARA AERLRIRRTT LVEKMRKYGM
SRQGGEEQAE D
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