| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3676 |
|---|
| Symbol | |
|---|
| ID | 6112635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 4092503 |
|---|
| End bp | 4093663 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641623462 |
|---|
| Product | aminotransferase class V |
|---|
| Protein accession | YP_001750527 |
|---|
| Protein GI | 170722839 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0159839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCGA ACTCATTAAT CTATTTAGAT GCAGCAGCCA CTACTCCGTG CGCCGATGAT
GTCATAAAAG AAATGATCAA ATTCAATAAA TCTAACTACG GAAATCCCTC CTCCACACAC
ATTTTAGGCA GACTTGCACG GAGCGCCATC CTTGAAAGCG CTTCACATAT TTCTGAGCTA
ATAGGCTGCA CATCAGCTGA AATAATTTTC ACATCAGGCG CCACAGAAAG CAATAACATC
GCGATTCTTG GGAGCGCCCC ACCCGACTCA AACAGCAATA TAATCATCTG CCCCATTGAC
CATAAATCCA GCCTTTTAGC CGCCGAAGAA TTGGAAAAGC GCAACGTAGA AATACGACGA
ATGAAAGTCG ATTCAAACGG CCGTGTCAAT TTACCCCACC TACACAGTCT GCTGGATACC
AATACATCAC TACTTTCCAT ATCCTACGTA AACTCTGAAA TAGGTACATT TCAAAACCTT
GTAGAAATAA AAAAGGCATT AGAAAAATCA AATGCATTGT TCCATATCGA TGCCGCTCAA
GCTCTCGGCA AACTTCCTAT AAACGTGAAA CAACTTGGCG TGGATTGCGC TTCGATTTCA
GCCCATAAAA TTGAAGGCCC CAAGGGCATA GGTGCGCTCT ATGTTTCTTC ATCTTGTATG
TCTCGTTTGC GCCCTCTAAC ATTTGGCGGC GGTCAATCTT CACTCCGCAG TGGAACACTT
CCCACTCAAC TGATCGCCGG ATTCGGTGCT GCGGCACGCC GATTAAAGAG CAAGGATTAC
CCTGCCTCAT GGGCTGCAGC GAAACAACTG AGAGATGCAA TCCTTGAAAC ACTAAACAAG
CATCAGATCT CTTACGTAAT TAACTCTCCA GACAACGTAT CAACACCTCA CATCTTGAAT
ATTTCCCTTC CCGCGATCCG CTCAGAAACC TTGATCAGCT GCTTGAGAAA CGTCTGCATC
TCTTCCGGCT CCGCCTGCAA CTCTAACAAT CTTGCCCCCT CTTACGTCAT CACTGGCATT
GGGCACGACG CAATAAGAGC CAATAGCGCG ATCCGCTTTT CCTTTACCAG CGACATGGAC
ATCAAAACCG TTCGAAAAGG CGCAGAGTCG CTTTCACAAA CAGTGCTGCA GCTTACCCAG
CTAAACAATA GGAACAAATA A
|
|---|
| Protein sequence | MPSNSLIYLD AAATTPCADD VIKEMIKFNK SNYGNPSSTH ILGRLARSAI LESASHISEL
IGCTSAEIIF TSGATESNNI AILGSAPPDS NSNIIICPID HKSSLLAAEE LEKRNVEIRR
MKVDSNGRVN LPHLHSLLDT NTSLLSISYV NSEIGTFQNL VEIKKALEKS NALFHIDAAQ
ALGKLPINVK QLGVDCASIS AHKIEGPKGI GALYVSSSCM SRLRPLTFGG GQSSLRSGTL
PTQLIAGFGA AARRLKSKDY PASWAAAKQL RDAILETLNK HQISYVINSP DNVSTPHILN
ISLPAIRSET LISCLRNVCI SSGSACNSNN LAPSYVITGI GHDAIRANSA IRFSFTSDMD
IKTVRKGAES LSQTVLQLTQ LNNRNK
|
|---|
| |