| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3645 |
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| Symbol | |
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| ID | 6112604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4060274 |
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| End bp | 4061464 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641623431 |
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| Product | cytochrome c-type biogenesis protein CcmI |
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| Protein accession | YP_001750496 |
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| Protein GI | 170722808 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0927546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAT TCTGGCTTGG TGCGGGCCTG CTGCTGCTCG CCGCCCTCAG CTTTCTGCTG
ATCCCGACCC TGCGTGGCCG TCGCCAGCAG CAGGAAGAAG ACCGTACTGC GCTGAACGTG
GCGCTGTATC AGGAACGTGT CGCCGAACTG GCTGCCCAAC AGGCCGCCGG TGTGCTGGAT
GACGCGCAAC TGGCCAACGG CCGCGATGAG GCCGCCCGTG AACTGCTGGC GGACACCGAA
GGCGCCGAAG CGCCTCGCCA GGGGCACCTG GGCAAGGTGC TGCCACTGCT GGCCGCAGTA
CTGGTGCCGG TGATGGCGCT TGGTCTGTAT CTGCACTTTG GTGCTGCGGA CAAAGTGGAG
CTGACTCAGG AGTTCGCTGC CGCGCCCAAG TCGATGGAAG AGATGACAAC GCGCCTGGAG
CGCGCCGTCC AGGCCCAGCC GGACTCTGCC GAAGGCCTGT ATTTCCTTGG CCGCGCCTAC
ATGGCCGAAC AGCGTCCGGC AGATGCCGCC AAGGCCTACG AGCGCGCCGT GGCCCTGGCC
GGTCGCCAGC CGGAACTGTT GGGCCAGTGG GCCCAGGCCC TGTATTTCGC TGCCAACAAG
CAGTGGAACG CACAGGTGCA GGCGCTGACC GACGAGGCGC TCAAGGCCGA CCCGAATGAA
GTGACCAGCC TTGGCCTGCG CGGCATTGCG GCCTTCGAAG GCGAGCGCTA CCAGGAAGCC
ATCGACTACT GGAATCGCCT GCTGGCGCAA CTGCCTGAAG GCGACACCTC GCGCGCGGCC
TTGCAAGGCG GCATCGACCG TGCTGCAGAG CGCCTGGGCG GCAGCACCGG CAAGCCTGCG
ACCCCGGTGA CAGCACGCCT GAAGGTGCGG GTCGAGCTGG CCCCGGCGCT CAAGGACAAG
GTCAAGCCCG ACGACACTGT GTTCATCTTC GCCCGTGCTA CCAACGGCCC GCCCATGCCG
CTGGCGGCCA AACGGGTGAC CGTGGCCCAA TTGCCGCTGG AGGTAGAATT GTCTGACGCC
GATGCGATGA TGCCGCAGAT GAAACTGTCC GACTTTGCCG AAGTCCAACT GGTTGCAAGG
GTATCGCGCG CTGGCCAGCC CACCCATGGT GAGTGGATCG GCCAAGGCGC ACCGCTGCCC
AGCAAGACCC AGGCCACCCA GCTCCTGACC ATCGACAGCC CCGATCCGTA A
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| Protein sequence | MTEFWLGAGL LLLAALSFLL IPTLRGRRQQ QEEDRTALNV ALYQERVAEL AAQQAAGVLD
DAQLANGRDE AARELLADTE GAEAPRQGHL GKVLPLLAAV LVPVMALGLY LHFGAADKVE
LTQEFAAAPK SMEEMTTRLE RAVQAQPDSA EGLYFLGRAY MAEQRPADAA KAYERAVALA
GRQPELLGQW AQALYFAANK QWNAQVQALT DEALKADPNE VTSLGLRGIA AFEGERYQEA
IDYWNRLLAQ LPEGDTSRAA LQGGIDRAAE RLGGSTGKPA TPVTARLKVR VELAPALKDK
VKPDDTVFIF ARATNGPPMP LAAKRVTVAQ LPLEVELSDA DAMMPQMKLS DFAEVQLVAR
VSRAGQPTHG EWIGQGAPLP SKTQATQLLT IDSPDP
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