| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3638 |
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| Symbol | |
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| ID | 6112597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4054794 |
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| End bp | 4055987 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641623424 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_001750489 |
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| Protein GI | 170722801 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.764265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGGG ACGTGACGGT CATTGGCGGT GGGGTGATCG GCCTGGCGAC AGCCTATGCG
CTGGTCCGTG AGGGCCTTTC GGTAGACCTC GTCGAGGCGC GTGACAGCCT GGCCTCTGCC
ACCAGTTTTG CCAACGGCGG GCAGCTGTCT TACCGCTACG TGGCGCCCTT GGCTGATGCC
GGCGTGCCTT GGCAGGCGCT GGGCTGGATG CTGCAGGGCG ATTCGCCGTT GCGTTTGCGG
CTGCGCCTGG ACCTGGCACA GTGGCGCTGG TTGATGGCGT TCATGCTGGC TTGCCGCAGC
AACGTCAACC GCCGCAACGG TGCACAGCTG CTGGAGCTGG CCCTGCACAG TCAGGCCACC
CTGGCGCGCT GGCGCGAGGA CGATGGGCTG GCTGATTTTG CCTGGCGGCG CAACGGCAAA
GTGGTTGCTT TTCGCAGTGA GTGGGCCTTC GCCCATGGGC GGGGCCACCT GCTCGACCCG
GTCAATCAAC AGGTACTCGA TGGGGGCGAG CTGAGGGCGC TTGAGCCGGC ATTGGCCGAG
GCAGCGTTCA TTGGCGGGGT ACTGACGCCC GATGAGGAGG TTGCCGACTG CCACCGTTTC
TGTGAACGCC TGGCCGAGCG CTTGCGTGCC TCCGGGCAGT GCCGTTTTCT GCTGGGCAGG
ACAGTGACGC GGTTGCACAT GCATCAGGAT CAGGTCGTGG CGCTGCAAGT GGGGGACGAG
CAGGTCGATG TACAGCGCCT GGTGCTGTGC GCCGGTCATC GCAGTGCGGC GTTGGCGCTG
CCGGGTTTGA AACTGCCGGT CTATCCGCTC AAAGGCTACA GCCTGACGGC GCCAATCGGC
TCGACGCATC GTGCGCCTGA GGTCAGCATT ACCGATTACG AGCGCAAGAT CGTTTATGCG
CGCCTTGACC GGCAACTGCG GGTGGCGGCG ATGGTGGATA TCGTCGGCTA CGACGAATCG
GTGGATGCGC GCCGGCTCCA AAGCATGCAC CGGCTGGCGC TCGATACGTT GCCCAATGCG
GCGGATTATA CGCAGGCGGT GGAGTGGGCG GGTATGCGGC CGGCGACGCC TACAGGGGTG
CCGATCATTG GCGGTACTGC TTACCGGAAC CTATGGCTGA ACCTGGGGCA TGGGGCCTTG
GGGTTCACCC TGGCCTGTGG CAGTGCGCAG CGCTTGGCCC GGATGATTGG GTGA
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| Protein sequence | MKRDVTVIGG GVIGLATAYA LVREGLSVDL VEARDSLASA TSFANGGQLS YRYVAPLADA
GVPWQALGWM LQGDSPLRLR LRLDLAQWRW LMAFMLACRS NVNRRNGAQL LELALHSQAT
LARWREDDGL ADFAWRRNGK VVAFRSEWAF AHGRGHLLDP VNQQVLDGGE LRALEPALAE
AAFIGGVLTP DEEVADCHRF CERLAERLRA SGQCRFLLGR TVTRLHMHQD QVVALQVGDE
QVDVQRLVLC AGHRSAALAL PGLKLPVYPL KGYSLTAPIG STHRAPEVSI TDYERKIVYA
RLDRQLRVAA MVDIVGYDES VDARRLQSMH RLALDTLPNA ADYTQAVEWA GMRPATPTGV
PIIGGTAYRN LWLNLGHGAL GFTLACGSAQ RLARMIG
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