Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3616 |
Symbol | |
ID | 6112575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4027656 |
End bp | 4029011 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641623402 |
Product | xanthine permease |
Protein accession | YP_001750467 |
Protein GI | 170722779 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease [TIGR03173] xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.267738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGT CACGCAAGGC GTACATTCCT GTGGCGCCAC CGCGAGAACC TCTGCCCCTG TTCCAACTGA TCCTGGTTGG CCTGCAACAC GTTCTGCTGA TGTACGGAGG CGCGATTGCC GTGCCTTTGA TCATCGGCCA GGCAGCCGGA TTGTCCCGTG AAGAAGTCGC TTTCCTGATC AACGCCGACC TGCTGGTCGC AGGCGTAGCT ACCATCATCC AGTCGTTCGG TATCGGCCCG GTAGGGATCC GCATGCCGGT GATGATGGGC GCCAGTTTCG CTGCCGTCGG CAGCATGGTG GCCATGGCCG GTATGCCTGG CGTAGGCCTG CAGGGGATAT TCGGTGCGAC CATCGCCGCC GGGTTCTTCG GCATGCTCAT CGCGCCGTTC ATGTCCAAGG TCGTACGCTT CTTCCCGCCG CTGGTCACAG GTACCGTGAT CACCTCTATC GGCCTCTCGC TGTTCCCGGT CGCCGTCAAC TGGGCCGGTG GCGGCCATGA GGCAGAAGCC TTCGGCTCGC CGATCTACCT GATGGTGGCA GGCCTGGTGC TGGCCGTGAT CCTGCTGATC AACCGCTTCA TGCGCGGTTT CTGGGTCAAC GTGTCGGTGC TGGTAGGCAT GGGCCTGGGT TACATCCTGG CCGGCTCCAT CGGCATGGTC GACCTGTCCG GCCTGGGCCA GGCACCGTGG CTGCAAGTGG TGACGCCACT GCACTTCGGC ATGCCGACCT TCAGCCTGGC ACCGATCCTG TCGATGTGCC TTGTGGTGGT GATCATCTTC GTCGAGTCCA CAGGCATGTT CCTCGCCCTG GGCAAGGTGA CCGATCGCGA AGTCACCCCA GGGATGCTGC GCCGGGGCCT GCTGTGCGAT GCTGGCGCGT CGTTCATCGC CGGGTTCTTC AACACCTTCA CCCACTCCTC GTTCGCCCAG AACATCGGCC TGGTGCAGAT GACCGGGGTA CGCTGCCGTT ATGTCACTGT GGTGGCCGGC GCGCTGCTGA TCCTGCTCAG CCTGCTGCCC AAGGCGGCAT ACCTGATCGC CTCGATCCCG CCTGCAGTAC TGGGCGGTGC GTCCATTGCC ATGTTCGGCA TGGTCACCGC CACCGGGATC AAGATCCTTC AGGAGGCAGA CATCGGCGAC CGACGCAACC AGCTGCTGGT TGCGGTCAGC GTCGGCTTCG GCCTGATCCC GGTGGTCCGT CCGGAGTTCT TCGCACAGAT GCCGCAGTGG ATGGAACCCA TCACCCACAG CGGTATCGCC ATGGCCACGG TCAGTGCCTT GGTGTTGAAC GTACTGTTCA ACATCCTCGG TGGTGCCGAC CGCGCGGCGC ACAACGACGC CTGTCACCAG CATTAA
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Protein sequence | MSESRKAYIP VAPPREPLPL FQLILVGLQH VLLMYGGAIA VPLIIGQAAG LSREEVAFLI NADLLVAGVA TIIQSFGIGP VGIRMPVMMG ASFAAVGSMV AMAGMPGVGL QGIFGATIAA GFFGMLIAPF MSKVVRFFPP LVTGTVITSI GLSLFPVAVN WAGGGHEAEA FGSPIYLMVA GLVLAVILLI NRFMRGFWVN VSVLVGMGLG YILAGSIGMV DLSGLGQAPW LQVVTPLHFG MPTFSLAPIL SMCLVVVIIF VESTGMFLAL GKVTDREVTP GMLRRGLLCD AGASFIAGFF NTFTHSSFAQ NIGLVQMTGV RCRYVTVVAG ALLILLSLLP KAAYLIASIP PAVLGGASIA MFGMVTATGI KILQEADIGD RRNQLLVAVS VGFGLIPVVR PEFFAQMPQW MEPITHSGIA MATVSALVLN VLFNILGGAD RAAHNDACHQ H
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