Gene PputW619_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3616 
Symbol 
ID6112575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4027656 
End bp4029011 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content63% 
IMG OID641623402 
Productxanthine permease 
Protein accessionYP_001750467 
Protein GI170722779 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.267738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGT CACGCAAGGC GTACATTCCT GTGGCGCCAC CGCGAGAACC TCTGCCCCTG 
TTCCAACTGA TCCTGGTTGG CCTGCAACAC GTTCTGCTGA TGTACGGAGG CGCGATTGCC
GTGCCTTTGA TCATCGGCCA GGCAGCCGGA TTGTCCCGTG AAGAAGTCGC TTTCCTGATC
AACGCCGACC TGCTGGTCGC AGGCGTAGCT ACCATCATCC AGTCGTTCGG TATCGGCCCG
GTAGGGATCC GCATGCCGGT GATGATGGGC GCCAGTTTCG CTGCCGTCGG CAGCATGGTG
GCCATGGCCG GTATGCCTGG CGTAGGCCTG CAGGGGATAT TCGGTGCGAC CATCGCCGCC
GGGTTCTTCG GCATGCTCAT CGCGCCGTTC ATGTCCAAGG TCGTACGCTT CTTCCCGCCG
CTGGTCACAG GTACCGTGAT CACCTCTATC GGCCTCTCGC TGTTCCCGGT CGCCGTCAAC
TGGGCCGGTG GCGGCCATGA GGCAGAAGCC TTCGGCTCGC CGATCTACCT GATGGTGGCA
GGCCTGGTGC TGGCCGTGAT CCTGCTGATC AACCGCTTCA TGCGCGGTTT CTGGGTCAAC
GTGTCGGTGC TGGTAGGCAT GGGCCTGGGT TACATCCTGG CCGGCTCCAT CGGCATGGTC
GACCTGTCCG GCCTGGGCCA GGCACCGTGG CTGCAAGTGG TGACGCCACT GCACTTCGGC
ATGCCGACCT TCAGCCTGGC ACCGATCCTG TCGATGTGCC TTGTGGTGGT GATCATCTTC
GTCGAGTCCA CAGGCATGTT CCTCGCCCTG GGCAAGGTGA CCGATCGCGA AGTCACCCCA
GGGATGCTGC GCCGGGGCCT GCTGTGCGAT GCTGGCGCGT CGTTCATCGC CGGGTTCTTC
AACACCTTCA CCCACTCCTC GTTCGCCCAG AACATCGGCC TGGTGCAGAT GACCGGGGTA
CGCTGCCGTT ATGTCACTGT GGTGGCCGGC GCGCTGCTGA TCCTGCTCAG CCTGCTGCCC
AAGGCGGCAT ACCTGATCGC CTCGATCCCG CCTGCAGTAC TGGGCGGTGC GTCCATTGCC
ATGTTCGGCA TGGTCACCGC CACCGGGATC AAGATCCTTC AGGAGGCAGA CATCGGCGAC
CGACGCAACC AGCTGCTGGT TGCGGTCAGC GTCGGCTTCG GCCTGATCCC GGTGGTCCGT
CCGGAGTTCT TCGCACAGAT GCCGCAGTGG ATGGAACCCA TCACCCACAG CGGTATCGCC
ATGGCCACGG TCAGTGCCTT GGTGTTGAAC GTACTGTTCA ACATCCTCGG TGGTGCCGAC
CGCGCGGCGC ACAACGACGC CTGTCACCAG CATTAA
 
Protein sequence
MSESRKAYIP VAPPREPLPL FQLILVGLQH VLLMYGGAIA VPLIIGQAAG LSREEVAFLI 
NADLLVAGVA TIIQSFGIGP VGIRMPVMMG ASFAAVGSMV AMAGMPGVGL QGIFGATIAA
GFFGMLIAPF MSKVVRFFPP LVTGTVITSI GLSLFPVAVN WAGGGHEAEA FGSPIYLMVA
GLVLAVILLI NRFMRGFWVN VSVLVGMGLG YILAGSIGMV DLSGLGQAPW LQVVTPLHFG
MPTFSLAPIL SMCLVVVIIF VESTGMFLAL GKVTDREVTP GMLRRGLLCD AGASFIAGFF
NTFTHSSFAQ NIGLVQMTGV RCRYVTVVAG ALLILLSLLP KAAYLIASIP PAVLGGASIA
MFGMVTATGI KILQEADIGD RRNQLLVAVS VGFGLIPVVR PEFFAQMPQW MEPITHSGIA
MATVSALVLN VLFNILGGAD RAAHNDACHQ H