Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3590 |
Symbol | |
ID | 6112548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3992949 |
End bp | 3994274 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641623376 |
Product | integrase family protein |
Protein accession | YP_001750441 |
Protein GI | 170722753 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTATA TCGTCCGCCG CCAGTCCGTT TACTACCTCA ACCTTCGACT GCCAAAGCAC CTGTTTCCAA ACCGGCACAC CCTTCGCATT TCTCTGCGTG TACGTGAGCG TCAGGCAGCC CTGTTCCTCG CCTCGTCCTT AGCTCAGCAG GTAAACAGCC ACCTGAGCGA ACACCCGTTA ACAGCTCCTG AGACGCTGCG TGCGTTGTGC GAGCAATGGC GAGTAATTGC ACCCCAACCA GCCGTTGCAA TAGCACCACG AGCCATTCCA GCAGCCACAC AGAAGCCGAG CCGCGAAGGC CCTACCCTAG CCACCCTCTC CAAGCTGTAT ATAGAAGAAG GGAAACGTGG TGGCACATGG CGGAGGGGCA GCACCGATGA CGTAGAGCGT TCCCTAGCTG ACCTGTTCGA GCTGATGGGT GATATGCCCG CGTTAGCCTT CGACACTCAG CAAGCTCGCC TACTAAAGGA ACGCCTTAGC CGCTGCCCCC AGTATTTCAA CCTACGTCCC GAGTTCAAGG GTAAGACCCT GAAGCAGGTG GTCGAGTCAG GCAGCACCTA CAAGACCATC ACTGCTGTCA CAGTGAACAA CCGGCTGCGG AAGCTCACTG CCTTCATGAA CTGGTGCAAG GCGAACGGGT ACGTCACCGA GAATCCCTTG GCCGGGATGA AGGTGATGAC AGGATCTGCC AAAGAGGCAC GACTGTCGTT TGACCGCCAT GATTTAGTCG CTCTGCTTAA CTGTCACGCA CTGCGGAAAG AGGCACGCAA GCACCCGTGG CGATACTGGC TGCCACTGCT TGGGCGAGCC ACTGGAGCAC GCCTAGAAGA GCTGTGCCAG CTACGAATTG ATGATTTCAT CGAGCAACAA GGGATTCATT GCATTCGCAT TGATGACAGC CATGAAGACC AGAAGCTGAA GAACGCCAGC AGTCGTCGGA TGCTCCCTCT GCACCCTGCC CTGTTGGACT TAGGTCTGCT TCAGCATGTC GAGTCAGTGA AAGCCAGCGG CGCTGATCGC CTGTTCCCTG AACTGGAAGC GGTGCGGGGG AAACTAGGCC ATGCCCCATC CAAGTGGTTC GGTCGGTACA AGACGAAGCT GGGCATCACC GATCCACGCA AGACCTTCCA CAGCTTTCGC CACACGCTCA TTGATGACCT GCGTGATGCT GGGGTGCAGG ACTCGCTCAT CAAGCGGATA GCCGGGCACG AAGATGGAGC AGTGACGTTC AGCATCTACG GCAGTAGGAG CCCACTGAAG GCGATGTTCG ATGCGCTTCG ACAAATTGCG GTGCGTGACG ACACATGGAC TTCCACCAGG CCCTAG
|
Protein sequence | MAYIVRRQSV YYLNLRLPKH LFPNRHTLRI SLRVRERQAA LFLASSLAQQ VNSHLSEHPL TAPETLRALC EQWRVIAPQP AVAIAPRAIP AATQKPSREG PTLATLSKLY IEEGKRGGTW RRGSTDDVER SLADLFELMG DMPALAFDTQ QARLLKERLS RCPQYFNLRP EFKGKTLKQV VESGSTYKTI TAVTVNNRLR KLTAFMNWCK ANGYVTENPL AGMKVMTGSA KEARLSFDRH DLVALLNCHA LRKEARKHPW RYWLPLLGRA TGARLEELCQ LRIDDFIEQQ GIHCIRIDDS HEDQKLKNAS SRRMLPLHPA LLDLGLLQHV ESVKASGADR LFPELEAVRG KLGHAPSKWF GRYKTKLGIT DPRKTFHSFR HTLIDDLRDA GVQDSLIKRI AGHEDGAVTF SIYGSRSPLK AMFDALRQIA VRDDTWTSTR P
|
| |