| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3533 |
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| Symbol | |
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| ID | 6112491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3893096 |
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| End bp | 3894325 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641623320 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001750385 |
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| Protein GI | 170722697 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.722317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCACCT TGACCTGGCT GCGTGTGGCC ACCCTTTGGC TGGAAGTCCG CATGAGACGC
ATATCCAACA CCCGCCGCAA CCTGCTGGCT GGCAGTCTCG GCCTGCTGGC CCTCGGCAGC
CTGCTGGCCT GGAAGACGCT CCCTATGGGC ACCTTGCCCA TAAGTACCGT CGCGGTCGCC
CGCGCGGACA TCGAAAGCAG CGTCACCGCC CTGGGTACCC TGCAGCCACG ACGGTATGTG
GATGTAGGCG CCCAGGCCTC CGGGCAGATC CGCAAGCTGC ACGTGGAGGC TGGCGATCAG
GTGCACACGG GGCAGTTGCT GGTAGAGATC GACCCCTCTA CCCAGCAGGC CAGGCTGGAC
GCCGGGCGGT TCTCGATCGA CAACCTCAAG GCGCAACTGG CCGAGCAGCG CGCCCAGTAC
CTGCTGGCCA CACAGCAGTA TCGGCGCCAG CGCGAACTGG CTGGTGCAGG CGCCACACGC
GAGGAAGACC TGCAGGCGGC CGACGCCCAG CTCAAGGTCA CCCAGGCCCG CATCGACATG
ATCCAGGCGC AGATCCGTCA GGCCCAGGCC AACCTGCGCA GCGACGAGGC TGAGCTTGGC
TATACACGCA TCTACGCGCC GATGGACGGT ACCGTGGTAG CGGTGGATGC CCGTGAAGGC
CAGACCCTCA ACGCCCAGCA GCAGACGCCT CTGATTCTGC GAATCGCCAA GCTTTCGCCG
ATGACCGTAT GGGCCCAGGT GTCCGAAGCC GATATCGGCA AAGTCAAACC TGGAATGACC
GCCTATTTCA CCACCCTGGC CGGCGGCAAA CGCCGCTGGA ACAGCACCGT GCGGCAGATC
CTGCCAATCC CGCCCAAGCC GCTGGCGCAC ACCAGCCAGG GCGGCGGCGG CCCTGCCAGC
GCGATCGCCG GTACGACAGG CAGCCAGGTG GTGCAGTACA CGGTGCTGCT CGACGTCGAC
AACCCCGATG GAGCGCTGAT GGCCGACATG ACCACCCAGG TGTTCTTCGT CGCCGGCCAG
GCCAGCCAGG TACTCACAGC GCCGCTGGCA GCACTGGACG ACACCGAGGC CGATGACCTG
CGCCTGGCCC AGGTACTGGG CCAGGATGGC AAGCTCGAAC AACGCACAGT GCGCATCGGC
CTCAGCGACC GGCTGCGGGC GCAAGTGCTC GATGGCCTCA GCGAAGGCGA GCGCCTGGTC
ATCGGTGCGC CCCTGGCCAG CGGAGGTTGA
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| Protein sequence | MRTLTWLRVA TLWLEVRMRR ISNTRRNLLA GSLGLLALGS LLAWKTLPMG TLPISTVAVA
RADIESSVTA LGTLQPRRYV DVGAQASGQI RKLHVEAGDQ VHTGQLLVEI DPSTQQARLD
AGRFSIDNLK AQLAEQRAQY LLATQQYRRQ RELAGAGATR EEDLQAADAQ LKVTQARIDM
IQAQIRQAQA NLRSDEAELG YTRIYAPMDG TVVAVDAREG QTLNAQQQTP LILRIAKLSP
MTVWAQVSEA DIGKVKPGMT AYFTTLAGGK RRWNSTVRQI LPIPPKPLAH TSQGGGGPAS
AIAGTTGSQV VQYTVLLDVD NPDGALMADM TTQVFFVAGQ ASQVLTAPLA ALDDTEADDL
RLAQVLGQDG KLEQRTVRIG LSDRLRAQVL DGLSEGERLV IGAPLASGG
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