Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3530 |
Symbol | |
ID | 6112488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3890424 |
End bp | 3891749 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641623317 |
Product | major facilitator transporter |
Protein accession | YP_001750382 |
Protein GI | 170722694 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCA TCGATACCGC TCGCCCGCCC CGGTTCAGCC GTGGCGACCA CCGGACCCTG GGCCTGGCGG CGCTGGGCGG CGCGCTGGAA ATCTATGATT TCATCATCTT CGTGTTCTTC GCCCTGACCC TCAGCCAGCT GTTCTTCCCG CCCGAAATGC CTGAGTGGCT GCGCCTGCTG CAAAGCTTCG GGATTTTCGT CACCGGCTAC CTGGCGCGGC CGCTCGGCGG CATCGTCATG GCGCACTTCG CCGATCACCT GGGCCGCAAA CGGGTATTCA GCCTGAGCAT CCTGATGATG GCACTGCCGT GCCTGCTGAT CGGGGTGATG CCGACCTATG CCGAGATTGG TTACGCGGCG CCGCTGATCT TGCTGGCGTT GCGCATTCTG CAGGGCGCTG CGGTCGGTGG TGAGGTGCCC AGTGCCTGGA CATTCGTTGC CGAACACGCA CCGCAAGGGC GGCGGGGTTA CGCTCTGGGC TTCCTGCAGG CCGGGTTGAC CTTTGGCTAT TTGCTGGGGG CACTGACCGC GACACTGTTG GCTCAGGTAT TTACCGCCCA GGAAATTCTC GATTACGCCT GGCGTTACCC GTTCCTGCTT GGCGGGGTAT TTGGTGTGAT CGGCGTGTGG TTGCGCCGTT GGCTGAGTGA AACACCGGTG TTTCTGGCCT TGCGCGAGCG CAAGGAGCAG CCGGTGAAGT TCCCGCTGCG ACGGGTGCTG GGCGAGCATC GTGGGGCGTT GGTCCCGGCT GCGCTGCTGA CCTGCGTGCT GACCTCGGCG GTGGTGGTGC TGGTGGTGAT CACACCGACG GTAATGCAGC AGCGCTTCGG CATGACCGCC GCGCACACTT TCGCCCTGAG CAGCGTAGGC ATCGTCTTTC TCAATATCGG TTGTGTGCTG GCCGGGCTGC TGGTCGATCG CCTGGGCGCC TGGCGGGCGC TGATGATCTA CAGCGTGCTG CTGCCGCTGG GTATCGGTGC CTTGTATGCG AGCCTGGTGG GGCAGTGGGG CATGACGTGG CTGGCTTACG CGTTGGCTGG GCTGTGCTGT GGTGTGGTGG GGGTGGTGCC GTCGGTCATG GTCGGGCTGT TCCCGGCGCA GATCCGGGTG TCGGGCATTT CCTTTACCTA CAACGTGGCT TATGCCTTGT GGGCCAGTAC CACGCCGCTG GCGTTGATAG CGTTGATGCC GTGGAGCCCG TGGGTCTGTG TGGGCTTTTG TCTGATCATG GGCGCGGTGG GGCTGCTCAC GGCCCTGTAC TTTGGGCGTC GGGAGCCTTT GGCGGTCGCG GCGGAGCCAA TGCCGATCAT GTGCGGTGAC AAATGA
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Protein sequence | MTAIDTARPP RFSRGDHRTL GLAALGGALE IYDFIIFVFF ALTLSQLFFP PEMPEWLRLL QSFGIFVTGY LARPLGGIVM AHFADHLGRK RVFSLSILMM ALPCLLIGVM PTYAEIGYAA PLILLALRIL QGAAVGGEVP SAWTFVAEHA PQGRRGYALG FLQAGLTFGY LLGALTATLL AQVFTAQEIL DYAWRYPFLL GGVFGVIGVW LRRWLSETPV FLALRERKEQ PVKFPLRRVL GEHRGALVPA ALLTCVLTSA VVVLVVITPT VMQQRFGMTA AHTFALSSVG IVFLNIGCVL AGLLVDRLGA WRALMIYSVL LPLGIGALYA SLVGQWGMTW LAYALAGLCC GVVGVVPSVM VGLFPAQIRV SGISFTYNVA YALWASTTPL ALIALMPWSP WVCVGFCLIM GAVGLLTALY FGRREPLAVA AEPMPIMCGD K
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