| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3509 |
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| Symbol | sucC |
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| ID | 6112467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3868339 |
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| End bp | 3869505 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641623296 |
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| Product | succinyl-CoA synthetase subunit beta |
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| Protein accession | YP_001750361 |
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| Protein GI | 170722673 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.019231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.863924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTC ACGAGTATCA GGGTAAGCAG CTGTTCGCTG AGTACGGCCT GCCAGTTTCC
AAGGGTTTCG CTGTCGATAC CCCTGAGCAA GCTGCAGAAG CCTGCGACAA GATCGGCGGT
TCCGAGTGGG TTGTCAAAGC CCAGGTCCAC GCTGGTGGTC GCGGTAAAGC GGGCGGCGTC
AAGCTGGTTC GCAGCAAGGA AGACGCCAAG GCGTTCGCTG CACAGTGGTT GGGCAAGAAT
CTGGTTACCT ACCAGACTGA TGCCAACGGT CAACCCGTCT CCAAGATTCT GGTCGAATCC
TGCACTGACA TCGCCAAAGA GCTGTACCTG GGCGCTGTAG TGGATCGTTC GAGCCGCCGT
ATCGTGTTCA TGGCGTCCAC CGAAGGTGGC GTGGACATCG AGAAAGTCGC TCACGAAACG
CCTGAGAAGA TCCTCAAGGC TACCATCGAC CCGCTGGTCG GCGCTCAGCC GTTCCAGGGT
CGTGAACTGG CATTCCAGCT GGGCCTGGAA GGTAAGCAGG TTCAACAGTT CGCCAAGATC
TTCGTTGGCC TGGCCAAGCT GTTCAAGGAT CACGATCTGG CCCTGCTGGA AGTGAACCCG
CTGGTGATCA AGGCCGACGG CGACCTGCAC TGCCTCGATG CCAAGATCAA CATCGACGCC
AACGCCATGT ACCGTCAGCC CAAGCTGAAG ACCTTCCACG ACCCGTCGCA GGACGACGCT
CGTGAAGCCC ACGCTGCCAA GTTCGAACTG AACTACGTTG CCCTGGAAGG CAACATCGGC
TGCATGGTCA ACGGTGCCGG CCTGGCCATG GGTACCATGG ACATCGTCAA CCTGCACGGC
GGCAAGCCAG CCAACTTCCT CGACGTAGGC GGCGGTGCTA CCAAAGAGCG CGTTACCGAA
GCGTTCAAGA TCATTCTGTC CGACAGCAAT GTCGCGGCCG TACTGGTCAA CATCTTCGGC
GGCATCGTTC GCTGCGACAT GATTGCCGAA GGCATCATCG GTGCAGTGAA AGAAGTCGGC
GTCAAGGTTC CGGTCGTCGT TCGCCTTGAA GGCAACAACG CCGAACTGGG CGCAAAAGTA
CTGGCAGAAA GCGGTTTGAA CATCATTGCG GCAACCAGCC TGACCGACGC TGCTCAACAA
GTTGTCAAAG CTGCGGAGGG CAAGTAA
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| Protein sequence | MNLHEYQGKQ LFAEYGLPVS KGFAVDTPEQ AAEACDKIGG SEWVVKAQVH AGGRGKAGGV
KLVRSKEDAK AFAAQWLGKN LVTYQTDANG QPVSKILVES CTDIAKELYL GAVVDRSSRR
IVFMASTEGG VDIEKVAHET PEKILKATID PLVGAQPFQG RELAFQLGLE GKQVQQFAKI
FVGLAKLFKD HDLALLEVNP LVIKADGDLH CLDAKINIDA NAMYRQPKLK TFHDPSQDDA
REAHAAKFEL NYVALEGNIG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVTE
AFKIILSDSN VAAVLVNIFG GIVRCDMIAE GIIGAVKEVG VKVPVVVRLE GNNAELGAKV
LAESGLNIIA ATSLTDAAQQ VVKAAEGK
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