Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3500 |
Symbol | |
ID | 6112458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3859607 |
End bp | 3860470 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641623287 |
Product | pirin domain-containing protein |
Protein accession | YP_001750352 |
Protein GI | 170722664 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.324071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.945982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCC CATTGGTGAT CCGCCCGCGT GCCGAGTCGG TCGAGGGCCA ACCGATCCTG CGCCCACTGC CGTCGGCGCA GTGCCGCAGC GTCGGCCCGT TCGTGTTCTT CGACCACATG CTCGAAACCG ACTATGCGCC GGGCCATGGC ATGGATATTC GCCAGCACCC GCATATCGGC CTGTCGACCC TGACCTACCT GTTCGAAGGC GCAATCCTGC ACAAGGACAG CCTGGGCTCG AATCAGCGCG TGTTGCCTGG CGATGTGAGC TGGATGACGG CCGGCAGCGG CGTGGCGCAT GTCGAACGCA CCCCGGCCGA TGCGTTGGCG CACGGTTCGC GCCTGCATGG GCTGCAGGTG TGGCTGGCGT CGCCCCGCGC GCTCGAGCAA GGCGCACCGA GCTATAGCCA TCACGCCGCG GCCAGCCTAC CAGTGAGCGA TAACCTGGGG GTACGCATCT GCATGATTGC CGGTAGCGGT TTCTGCCTGG AATCGCCGGT ACCAGTCCTC TCCCCTACCC TTTACGCGCA TGTGCAGATG CAATCGGCGA CCACGCTGGT GGTACCTGAT GAGCATGCGC AACGGGCGCT CTATCTGCTC GACGGCGAGC TGATGCTGAA TGATGAGGAA GTCGAGGCGT GCAGCTTGGT GGTGCTGCCT GAGGGCGAAG AGATTGCCTT GTATGCCGAG GGTGAATGCG AATTGGTATT GATCGGCGGC GAGCGGCTGG ATGGGCCGCG GCGGATGAAC TGGAATTTTG TGGCCAGTGA CCCGCAACTG ATCGAACACG CCCGGGCGAA ATGGGCTGCC GGCGATTGGC CGGTGGTGCC GGGGGAGACT TCGCGGATCG AGCTACCGCG TTAA
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Protein sequence | MSSPLVIRPR AESVEGQPIL RPLPSAQCRS VGPFVFFDHM LETDYAPGHG MDIRQHPHIG LSTLTYLFEG AILHKDSLGS NQRVLPGDVS WMTAGSGVAH VERTPADALA HGSRLHGLQV WLASPRALEQ GAPSYSHHAA ASLPVSDNLG VRICMIAGSG FCLESPVPVL SPTLYAHVQM QSATTLVVPD EHAQRALYLL DGELMLNDEE VEACSLVVLP EGEEIALYAE GECELVLIGG ERLDGPRRMN WNFVASDPQL IEHARAKWAA GDWPVVPGET SRIELPR
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