Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3496 |
Symbol | |
ID | 6112454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3854517 |
End bp | 3856448 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641623283 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001750348 |
Protein GI | 170722660 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAGAC GCCTGAGCTG GGATATCCAC ACCCGTACGC AGATCATAAG CCTAGGCCCT GCGCTGCTGC TGACATTGCT GCTGATCAGC TTCTTCACCT TCGTGCGCAT CCAGGACTTG CGCCAGGAGC TCAACCATAC CGGTCAGTTG ATCGCCAATC AGTTGGCTCC AGCGTCCGAG TACGGTGTGA TCTCGGGCAA CAACGAAGTG CTCGAAGGCC TGATGCGCGC CACCCTGAGC ATCCCCCACG TGCGCTTTCT GGAAGTGCAG GACAGCCGCA ACCACATCCT GGTGTACGTC GAGCAGTCAG ACGAGAGCGC TAACCGGGCA CAACGCGTAG AGGTGTTCCA GGCGCCGATC CGGCTTCAGC AAATCCGCCT GGACAACGAC TTCCTGCAGC AGGGCAAAGC GCCGTCGCCG GCAATCGGGG ACGATTATCT GGGGCGGGTG ATCGTCGGCA TGTCGGACGA CGCCTTCAGC CAGCGCCAAC AGGAGATCGT TATCAAGGCT GGCATCCTGG CGCTGTTCGC CCTGTTGTTC ACCTTCCTGC TCGCACGCCG CCTGGCCATG AGCCTCGCAA AGCCGATCAG CGACATGGGC CATGCCGTCA AGGCCATCCA GCAAGGTGAC TACAACACCC CGCTGCCGGT GGTCGACGAC AGCGAGCTGG GCCACCTGGC ACGCCACATC AACAACCTGG CCAGCGCACT GGAACAGGCC AGCGCCGAAC AGAAACAGGC CATTGCCCAG TTGATTCAGG CCCGCGAGGA AGCCGAGCAG GCCAACGGCG CCAAATCGGA ATTCCTGGCG ATGATGAGCC ACGAGTTGCG TACTCCCATG AACGGCGTGC TGGGCATGCT GCAACTGCTC GAAACCACCC AGTTGACCAG CGAGCAAGCC GAATACACGG CTGTGGCCAG CGAATCCACC GGGCACTTGC TCAAGGTGAT CAACGACATT CTCGATTTCT CGCGGATCGA ACGCACCACA CTGCAACTGG AGCATATCGA CTTCAATCTC GGCGAGCTGA TCGCCAGCAG CGTGCAGTCC TTCCAGCACA GCGCACAGCA ACGAGGCCTG GATCTGCAGC TGCAATTACC GACCCAGAGC GAGCGGCTGC AGGTGGTGGG CGACCCGACA CGCATCCGCC AAATCCTCCT CAACCTGGTC GGCAATGCCC TGAAGTTCAC TGAACGCGGC CAGGTGCAGG TCGAGGCTCG GTGGCAGGCG CTCGATCGTC AGACCTTGTG GTTCACGTGC AGCGTGCGCG ACACAGGTAT CGGCATCGAC AGCGAACGCC TGGAAATGAT GTTCGTCGCC TTCCAGCAGG CCGACAGCTC GATTTCACGG CGCTATGGCG GTACTGGCCT GGGGCTGTCC ATCGCTCGTA CCCTTGCTGA ACGCATGGGC GGCAAGCTGC GTGGCGAAAG CCACGAAGGG CTGGGTTCGA CCTTCACCCT GGAAATGCCG CTCGCCCTGG CCAGCCCTGC GTCTGCGACA TTGCCCGGCG CGCTGGCGGC TCACACACCG CTCGCCGAAG GCGAACGGAT CCTTTTGGTG GAGGACAACC CGGTCAATCA GAGCGTTATC GAAGCCATGT TGCGCAGCCT GGGGCTGGAA GTCAGCGTGG CCCATGACGG CATCCAGGCC GTTGAAAAGG TCAGCCAGCA GCACTTTGCG GCCATACTGA TGGACTGCCG CCTGCCACAG GTCGATGGTT ATGAAGCCAC ACGACGCATA CGCCTGCTGC CCAACGGCGG CAAGCTACCG ATCATCGCCT TGACCGCCAA CGCCCTGCAG GGTGATCGGG AACGCTGCAT GGCCGCCGGC ATGGACGATT ACCTGAGCAA ACCGTTGCGC CGCACTGACC TGCAGCAGGT GTTACAACGC TGGCTGCCCG GCCGGACAGT CGCGACTGGC GATAAATGCT AA
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Protein sequence | MTRRLSWDIH TRTQIISLGP ALLLTLLLIS FFTFVRIQDL RQELNHTGQL IANQLAPASE YGVISGNNEV LEGLMRATLS IPHVRFLEVQ DSRNHILVYV EQSDESANRA QRVEVFQAPI RLQQIRLDND FLQQGKAPSP AIGDDYLGRV IVGMSDDAFS QRQQEIVIKA GILALFALLF TFLLARRLAM SLAKPISDMG HAVKAIQQGD YNTPLPVVDD SELGHLARHI NNLASALEQA SAEQKQAIAQ LIQAREEAEQ ANGAKSEFLA MMSHELRTPM NGVLGMLQLL ETTQLTSEQA EYTAVASEST GHLLKVINDI LDFSRIERTT LQLEHIDFNL GELIASSVQS FQHSAQQRGL DLQLQLPTQS ERLQVVGDPT RIRQILLNLV GNALKFTERG QVQVEARWQA LDRQTLWFTC SVRDTGIGID SERLEMMFVA FQQADSSISR RYGGTGLGLS IARTLAERMG GKLRGESHEG LGSTFTLEMP LALASPASAT LPGALAAHTP LAEGERILLV EDNPVNQSVI EAMLRSLGLE VSVAHDGIQA VEKVSQQHFA AILMDCRLPQ VDGYEATRRI RLLPNGGKLP IIALTANALQ GDRERCMAAG MDDYLSKPLR RTDLQQVLQR WLPGRTVATG DKC
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