Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3460 |
Symbol | |
ID | 6112418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3809844 |
End bp | 3810707 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641623247 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001750312 |
Protein GI | 170722624 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.143807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.568663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGT TCCAGCTTCG CGCTTTCGAC GCCGTCGCCC GTGAGGGCAG TTTCACCCGT GCTGCTGCGC GCTTGTTCAT TAGCCAGCCG GCGGTGACCG GGCACGTCAA GGCGTTGGAA GAGCACTACC AGATCACCCT GTTACGGCGC ACGGCACGGC GGGTGGAGCT GACCGAGGAG GGTACCCGCC TTGCGGCTAT CACCCGGGCG ATGTTCGGCC TGGCCGAAGA GGCACAGGCG ATGCTCGAGG CCAATCGCCA ATTGCTCACC GGCCGCTTGG AGGTGGCCGC AGATGGGCCG CACCGGGTCA TGCCGATGCT GGCGCTATTG CGTGAACGCT ACCCGGGCAT CACCGTCAAC CTGCGCCTGG GCAATGCCCA GGAGACCTTG GCCGCATTGT TGTCAGAGCA TGCCGACGTG GCCGTATTGA CCGAGATCGA ACCGCGCAAG GGCCTTTACT TGCAAAACCT CTGCGAGTCG CGTTTGTGCG CACTGCTGCC GGCAGGCCAT GCCTGGGCTA GCGGGCAGGG TGACCTGCCA CTGGCTGCTC TGCATGAACA GATCATGGTA CTGCGCGAAC CCAGTTCGAC CACCCGGCGA ACCTTCGACA AGGCGTGTGA CCAAGCGTCG GTAAGGCCCA GGGTGTTGCT GGAGCTGGAC AGCCGTGAGG CAGTCACCGA GGCAGTGGCG TCGGAGCTTG GGATTGGTGT GGTCTCCTCG ACCGAGGTGG CCAATGACCC ACGAGTGGTG GCGCGGCCGC TGGTCGGCCA CGGTTTGCGT AACCAGCATC TGGTGGGATG CCTGGAGCGG CGCCGCGAGC TGCGGCTGAT CCAGGCGTTC CTGGCCTTGG CTGCCAGTCT GTAA
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Protein sequence | MNLFQLRAFD AVAREGSFTR AAARLFISQP AVTGHVKALE EHYQITLLRR TARRVELTEE GTRLAAITRA MFGLAEEAQA MLEANRQLLT GRLEVAADGP HRVMPMLALL RERYPGITVN LRLGNAQETL AALLSEHADV AVLTEIEPRK GLYLQNLCES RLCALLPAGH AWASGQGDLP LAALHEQIMV LREPSSTTRR TFDKACDQAS VRPRVLLELD SREAVTEAVA SELGIGVVSS TEVANDPRVV ARPLVGHGLR NQHLVGCLER RRELRLIQAF LALAASL
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