Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3445 |
Symbol | |
ID | 6112403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3793399 |
End bp | 3795078 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641623232 |
Product | putative monovalent cation/H+ antiporter subunit D |
Protein accession | YP_001750297 |
Protein GI | 170722609 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.260298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.224731 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAAA TGAGTCAACT GATCATCGCC CCCATCCTGC TGCCGTTGCT GACCGCAGCA GTGATGCTGA TACTGGGCGA GAAGCACCGC CTGCTCAAGG CGCGTCTCAA CCTGCTGTCG ACCTTCAGCG GGCTGGTCAT CGCCATCAGC TTGTTGTTGT GGGTGCGCGT CCAGGGGCAA GCGGAATCGA TTGGTGTGTA CCTGCCGGGC AACTGGCCCG CACCTTTCGG CATTGTGCTG GTGGTTGATC ACCTGTCGGC GCTGCTGCTG ACTTTGACCG GGGTCATCGG CATCAGCGCC CTGCTGTTCG CTCGCGCCCG CTGGGACAGC GCCGGCGCCA GCTTCCACGC ACTGTTCCAG ATCCAGTTGA TGGGCCTGTA TGGCGCCTTC CTGACTGCCG ACCTGTTCAA CCTGTTCGTG TTTTTCGAAG TCCTGCTAGC GGCCTCTTAT GGGCTGCTTC TGCATGGCTC GGGACGAGCG CGGGTGCGGG CCGGCCTGCA TTACATCGCC ATCAACCTAT TCGCTTCTTC GCTGTTTCTG ATTGGCGCCG CGATGCTTTA CGGCGTGACC GGCACCCTCA ACATGGCCGA CCTCGCGCTC AAAGTACCGT TAGTGCCCGA AGCCGACCGT GGTTTGCTGC ACGCAGGCGC GGCAATTCTG GCCATAGCCT TCTTGGCAAA GGCCGGCATC TGGCCGCTGA ATTTCTGGCT GGTACCGGCC TATGCCTCGG CCAGCGCACC CGTAGCCGCA TTGTTCGCCA TCATGACCAA GGTCGGCCTG TACGCAGTGT TGCGGCTCTG GTCCCTGTTG TTCTCGGGCC AGGCCGGTGC ATCCGCGCAT TTCGGCGGGC AGTGGCTGAT CTATGGGGGG TTGGTCACCC TTGCCATCGC AGCCGTGTCG ATACTTGCCG CACAACGACT GGAGCGCATA GCAGCGCTGA GCATACTTGT TTCGGCAGGC ACTCTGCTTG GCGCGATCGG CTTTGCCCAG CCCGTCCTGA CTGGTGCAGC ATTGTTCTAT CTGGTCAATT CAACCCTGGC ACTGTGTGCA CTGTTCCTGC TCGCCGAGCT GGTGGAACGC TCCCGCTCGG CCAACGAGCC ACCACTGGAG GACGAAGAAG GCAGCATGCC TTCGCCACTC GAGTCGTTGC ATCCACCCAA AGGTATCAAC CTGGACGATG AGCAGAAGGC AGTGATCGGC CAGATCATTC CCTGGACCAT GGCGTTTCTG GGCCTGAGTT TCATTGCCTG TGCATTGCTG ATCATCGGCA TGCCACCGCT TTCCGGCTTC GTCGGTAAAC TCAATTTGAT CAGTGCGCTG TTCAACCCAC TAGGGTTGGG TGTGCCGGCC GAGCGACCGC TATCTGCGGC CGCCTGGGCG CTGGTAGTAC TGCTCGTCCT GTCTGGCATG GCTTCGCTGA TCGCTTTCGG GCGCGTGGGC ATCCAGCGCT TCTGGAAGCC TGAAGAGCGG CCCTCCCCCG CGCTGCGACA CTACGAATGC CTGCCGATCG TCATTTTGCT GGGCCTTTGC ATCATGCTCA GCTTCCGAGC CGAGCCGCTG CTACGTTACA CCCAGGACAC TGCTGCCAGC CTGCAAACCC CTGACACCTA CATCAGGGCC GTAATGGCCG CGCAGCCGAT CCCTGGCCCG ACCACGCTCG ACGCACAGGT GCAGCCATGA
|
Protein sequence | MSEMSQLIIA PILLPLLTAA VMLILGEKHR LLKARLNLLS TFSGLVIAIS LLLWVRVQGQ AESIGVYLPG NWPAPFGIVL VVDHLSALLL TLTGVIGISA LLFARARWDS AGASFHALFQ IQLMGLYGAF LTADLFNLFV FFEVLLAASY GLLLHGSGRA RVRAGLHYIA INLFASSLFL IGAAMLYGVT GTLNMADLAL KVPLVPEADR GLLHAGAAIL AIAFLAKAGI WPLNFWLVPA YASASAPVAA LFAIMTKVGL YAVLRLWSLL FSGQAGASAH FGGQWLIYGG LVTLAIAAVS ILAAQRLERI AALSILVSAG TLLGAIGFAQ PVLTGAALFY LVNSTLALCA LFLLAELVER SRSANEPPLE DEEGSMPSPL ESLHPPKGIN LDDEQKAVIG QIIPWTMAFL GLSFIACALL IIGMPPLSGF VGKLNLISAL FNPLGLGVPA ERPLSAAAWA LVVLLVLSGM ASLIAFGRVG IQRFWKPEER PSPALRHYEC LPIVILLGLC IMLSFRAEPL LRYTQDTAAS LQTPDTYIRA VMAAQPIPGP TTLDAQVQP
|
| |