Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3423 |
Symbol | |
ID | 6112376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3767298 |
End bp | 3769262 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641623206 |
Product | DNA topoisomerase III |
Protein accession | YP_001750276 |
Protein GI | 170722588 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGT TCCTCTGCGA AAAACCCTCC CAGGCAAAAG ACATCGCCAA GATCCTTGGC GCCAACCGCA AGGGCGACGG CTGCTGGCAA GGCACCGACG TCTGCGTCAC CTGGTGCATA GGCCACCTGT TGGAAACCGC TCCGCCTGAC AGCTACGACG AACGTTACAA GCGCTGGAAC CTCGCCGACC TGCCGATCAT TCCGGAAAAG TGGAAGATGC TGGTCAAACC CAAGACTGCC AGCCAGTTCA AGGCCGTCAA GCGCCTGCTC GGCGAAGCAC GAGAACTGGT AATCGCCACC GATGCCGACC GCGAAGGCGA AATGATCGCC CGCGAGCTGG TCGAACATTG TCGCTACCGT GGGCCCATTC AGCGCCTGTG GCTGTCCGCA CTGGACGATG CCTCGATTCG CAAGGCCCTT GCGCGTCTGT TGCCGGGGCA GGACACCTTC AACCTCTATC ACTCGGCGCT CGGCCGCTCA CGCGCCGACT GGCTCATAGG CATGAACATG AGCAGGCTTT TCACCCTGTT GGGCCGCCAG TCCGGCTATC AGGGTGTGCT ACCGGTGGGC CGGGTACAAA CACCCACCCT GCGCCTGGTG GTGGACCGCG ACCGCAGCAT CGCTGATTTC GTACCGGTAC CGTTCTGGGC CATCGAGGTG CAACTCGAGC ATGCCGGCCT GGTCTTCAAT GCACAATGGC GGGCCCCGGA GGGCATCTGT GACGACCAGG GCCGCTGCCT TAACCAGGCG CTGGCCCAAC AGGCCGCCAC AGACATCGGG AACGCCCGCT CCGCACGGGT GCTCAAGGTG ACCACCGAAC GCGTACGCGA GGCAGCACCC CTGCCCTTCG ACCTCGGCAC CCTGCAGGAA TTGTGCTCAA AGAAATTCGG CCTTGGCGCC CAGGAAACCC TCGACATTGC CCAGGCCCTG TACGAAACCC ACAAGCTGAT CACTTACCCA CGGAGCGACT GCGGCTACCT GCCCGTCAGC CAGCACAGCG AAGCGCCGGC AATCCTCACT GCATTGCAGC GCGTCGATAG CAGCCTGGCG CCGTTGCAAG CGCACCTTGA GCCGCAGCGC CGCTCGCGGG CCTGGAACGA TGCCAAAGTT ACCGCGCACC ACGGCATCAT CCCTACCGCG GCCGCCAGCG ACCCGTCGCG CTTGCCTGCC AAGCACAAGG CGGTCTATAC CCTGATCCGT GCCCGTTACC TGGCCCAGTT CCTGCCCAAC CACGAGTACG ATCGAACCCA GGCCGAGTTC GACTGTGCAG GCCATGCCCT GCGCGCCGTG GGCAAGCAGA TCGTGGAGCC GGGCTGGCGT CGCGCATTAC CCGAAGCGCT GGCCCCGGCC AAGGGTCGCG AAGCCCCGCC GGCGCAGGTC CTGCCAACAT TGTGTGAAAG TCAGGACTGC TCCGTACAGG GCCTGCAGTT GAAGGACCTC TGGACCCAAC CGCCCAAACC CTTCACCGAA GGCGACCTGA TCAAAGCCAT GAAGAACGTC GCCAAGCTGG TGGACGACCC GCGGCTGAAA CAGAAGCTCA AGGAAACCAC CGGCATCGGT ACTGAGGCGA CCCGTGCCAG CATCATCCAG GGCCTGCTCG ACCGGGGCTA TCTGGTCAAG AACGGCAAGG CACTGGCGGC CACCCCAGCC GCATTCAGCC TGATCGACGC CGTGCCACGC GCCATCGCCG ACCCAGGTAC CACGGCAATC TGGGAGCAGG CGCTGGACAT GGTGCAAAGT GGTGAAATGA GCCTGGAGGA CTTCGTTGCG CGGCAGTCGG CATGGATGGG TAAGCTGGTG GAGCGCTGCA GCGGCATGCG CATGACCATA AACGGGCCAG CGGTGGGCAA GGCGGCGCCG TGGAAGAAAA AGCGCAGGAA CGGGGGCAAA GGCAAGCTTG CAGCGAGCGG TGCCAAGACC ACGGCCAGCA AGCCGCGACA GCCTCGGCGC AAGGCCCCCA ACTGA
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Protein sequence | MRLFLCEKPS QAKDIAKILG ANRKGDGCWQ GTDVCVTWCI GHLLETAPPD SYDERYKRWN LADLPIIPEK WKMLVKPKTA SQFKAVKRLL GEARELVIAT DADREGEMIA RELVEHCRYR GPIQRLWLSA LDDASIRKAL ARLLPGQDTF NLYHSALGRS RADWLIGMNM SRLFTLLGRQ SGYQGVLPVG RVQTPTLRLV VDRDRSIADF VPVPFWAIEV QLEHAGLVFN AQWRAPEGIC DDQGRCLNQA LAQQAATDIG NARSARVLKV TTERVREAAP LPFDLGTLQE LCSKKFGLGA QETLDIAQAL YETHKLITYP RSDCGYLPVS QHSEAPAILT ALQRVDSSLA PLQAHLEPQR RSRAWNDAKV TAHHGIIPTA AASDPSRLPA KHKAVYTLIR ARYLAQFLPN HEYDRTQAEF DCAGHALRAV GKQIVEPGWR RALPEALAPA KGREAPPAQV LPTLCESQDC SVQGLQLKDL WTQPPKPFTE GDLIKAMKNV AKLVDDPRLK QKLKETTGIG TEATRASIIQ GLLDRGYLVK NGKALAATPA AFSLIDAVPR AIADPGTTAI WEQALDMVQS GEMSLEDFVA RQSAWMGKLV ERCSGMRMTI NGPAVGKAAP WKKKRRNGGK GKLAASGAKT TASKPRQPRR KAPN
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