| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3416 |
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| Symbol | |
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| ID | 6112369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3759211 |
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| End bp | 3761436 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641623199 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001750269 |
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| Protein GI | 170722581 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.379294 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCC GTTCCAAGAT CATCTATACC TTCACCGACG AAGCCCCCGC CCTCGCCACC
TACTCGCTGC TGCCGATCGT CGAAGCTTTC ACCGCTTCGG CTGACATCGC CGTCGAAACT
CGCGACATTT CCCTGGCTGG CCGCATCCTC GCGGCATTCC CGGAGCAACT GGGCACCGAG
AAGCAGGTAG GCGATCACCT GGCGGAACTG GGCCAGCTGG CTACCACACC TGAAGCCAAC
ATCATCAAGC TGCCGAACAT CAGCGCCTCG GTACCGCAGC TCAAGGCCGC GATCAAGGAA
CTGCAAGGCA AGGGCTTCAA CATCCCGGAC TACGCCGACG AACCGGCCAC CGCGGAAGAA
AAAGAATCCC GCGCGCGTTA CGACCGCATC AAGGGCAGCG CCGTGAACCC GGTACTGCGC
GAAGGCAACT CCGACCGCCG CGCACCGCTG TCGGTCAAGA ACTACGCGCG CAAGCACCCG
CACAAGATGG GTGCCTGGGC CGCCGACTCC AAGTCGCACG TTGCCCACAT GACCCAAGGC
GACTTCTACG GCAGCGAAAA GGCCGCACTG ATCGAGGCTG ACGACAGCCT GCGCATCGAG
CTGGTCGCCA AAGACGGCAG CACCACCGTG CTGAAAGAAA AGACCGCCGT CAAAGCCGCC
GAAATCATCG ACTGCGCAAC CATGAGCCGC AAGGCACTGA AAGCCTTCAT CGCCGAGCAG
ATCGCCGATG CCAAGGCCTC GGGCGTGCTG CTGTCGGTGC ACCTGAAAGC CACCATGATG
AAGGTTTCGG ACCCGATCAT GTTCGGCGTC ATCGTCGAAG CCTTCTACGG CGAAGTGCTG
GCCAAGCACG CTGCCGCGCT GGCCGAAGTG GGCTTCAATG CCAACAACGG CATCGGTGAC
CTGTATGCCC GCATCAAGGA TCTGCCAGCC GACAAGCAGG CCGAGATCGA AGCCGACATC
CAGGCCCTGT ACGCCGAGCG CCCGGCCCTG GCCATGGTCA ACTCCGACAA AGGCATCACC
AACCTGCACG TGCCGAGCGA CGTGATCGTC GACGCCTCGA TGCCGGCCAT GATCCGTGAC
TCGGGCAAGA TGTGGAACAC CGCTGGCGAG CTGCAGGATG CCAAGGCGAT CATCCCGGAC
CGCTGCTACG CCGGCATCTA CCAAGCCACC ATTGAAGACT GCAAGGCCAA CGGCGCGTTC
GACCCGACCA CCATGGGCAG CGTACCGAAC GTAGGCCTGA TGGCACAGAA GGCCGAAGAG
TACGGCTCCC ACGACAAGAC TTTCCAGGTC AAGGCCGACG GTGTCGTGCG CGTGGTCGAT
GGCAAGGGCA AGGTCGTTCT GGAGCAGAGC GTCGAAGCCG GTGACATCTT CCGCATGTGC
CAGACCAAAG ACGCCCCGAT CCAGGACTGG GTCAAGCTGG CCGTCAATCG CGCCCGCCTG
AGCAACACCC CGGCAGTGTT CTGGCTGGAC CCGGCGCGCG CCCACGACGG CGTGATGATC
GAGAAGGTGC AGAAGTACCT GAAGGATCAC GACACTGCCG GCCTGGACAT CCGTGTTTTG
GCACCGGTCG ACGCCATCAA GTTCTCGCTC GCCCGCATCC GCGAAGGCAA GGACACCATC
TCGGTGACCG GCAACGTGCT GCGCGACTAC CTGACCGACC TGTTCCCGAT CATGGAACTG
GGCACCAGCG CCAAGATGCT GTCGATCGTG CCGCTGATGA ACGGCGGCGG CCTGTTCGAA
ACCGGCGCTG GCGGTTCGGC ACCCAAGCAC GTGCAGCAAC TGGTTGAAGA AAACTTCCTG
CGTTGGGACT CGCTGGGTGA ATTCCTGGCC CTGGCCGCTT CCCTGGAGCA CCTGGGCAAC
ACCTACGACA ACCCGCGCGC CAAGGTCCTG GCCAACACCC TGGACCAGGC CACCGGCAAG
TTCCTAGACA CCAACAAGTC GCCTTCGCGC AAAGTCGGCG GTATCGACAA CCGCGGCAGC
CACTTCTACC TGACCCTGTA CTGGGCAGAA GCGCTGGCCG CCCAGACTGA CGACGCCGCC
CTGCAGGCGC GCTTCGCACC GCTGGCAAAA ACCCTGGCCG AGAACGAAGC GACCATCGTC
GCCGAGCTCA ACGCCGTGCA GGGCAAGCCG GCCGACATCG GTGGCTACTA CGCGCCGGAT
GCCGAGCTGA CCGCCAAGGT AATGCGCCCA AGCCAGACCC TGAACAGCGC CATTGCCGCC
CTGTAA
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| Protein sequence | MPTRSKIIYT FTDEAPALAT YSLLPIVEAF TASADIAVET RDISLAGRIL AAFPEQLGTE
KQVGDHLAEL GQLATTPEAN IIKLPNISAS VPQLKAAIKE LQGKGFNIPD YADEPATAEE
KESRARYDRI KGSAVNPVLR EGNSDRRAPL SVKNYARKHP HKMGAWAADS KSHVAHMTQG
DFYGSEKAAL IEADDSLRIE LVAKDGSTTV LKEKTAVKAA EIIDCATMSR KALKAFIAEQ
IADAKASGVL LSVHLKATMM KVSDPIMFGV IVEAFYGEVL AKHAAALAEV GFNANNGIGD
LYARIKDLPA DKQAEIEADI QALYAERPAL AMVNSDKGIT NLHVPSDVIV DASMPAMIRD
SGKMWNTAGE LQDAKAIIPD RCYAGIYQAT IEDCKANGAF DPTTMGSVPN VGLMAQKAEE
YGSHDKTFQV KADGVVRVVD GKGKVVLEQS VEAGDIFRMC QTKDAPIQDW VKLAVNRARL
SNTPAVFWLD PARAHDGVMI EKVQKYLKDH DTAGLDIRVL APVDAIKFSL ARIREGKDTI
SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMNGGGLFE TGAGGSAPKH VQQLVEENFL
RWDSLGEFLA LAASLEHLGN TYDNPRAKVL ANTLDQATGK FLDTNKSPSR KVGGIDNRGS
HFYLTLYWAE ALAAQTDDAA LQARFAPLAK TLAENEATIV AELNAVQGKP ADIGGYYAPD
AELTAKVMRP SQTLNSAIAA L
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