Gene PputW619_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3223 
Symbol 
ID6112175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3558111 
End bp3558872 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content62% 
IMG OID641623010 
Producthypothetical protein 
Protein accessionYP_001750082 
Protein GI170722394 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000006749 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.26431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATA TCGCCGTACT CTCCCTGTTC GCTTTTGCCG CCGGCCTGAT CGATGCTGCG 
GTAGGAGGTG GTGGGCTCAT TCAGATTCCG GCGCTGTTCA ACGTATTGCC CGCGGCGCAA
CCTGCGGCCT TGCTTGGCAG CAACAAACTG GCATCGGTGT GCGGCACCGC TTTCGCGGCG
CGCTCGTTCA TTCGCAAGGT CACCCTGGAC TGGGGGTTGA TCGTGCCGGC GGCGCTCAGT
GCGTTCATCA TGTCGTTCGC AGGGGCCGCC ACGGTGTCGC TGGTGCCGCC CAGCGTGATG
CGCCCGGCAG TGCTGGTGCT GATCGTGCTG ATGGCGATCT ACACCTTTTG CAAGAAGGAT
TTCGGCACCT TGCACGCGCC GGCGAAGATC GGCCGCAAGG AGCAATGCCT GGCGGTACTG
ATCGGCGGCG CCATCGGTTT CTATGACGGC CTGTTCGGGC CAGGTACCGG CAGCTTCCTG
ATCTTCCTGT TCATTCGCTT TTTCGCGTTG GACTTCCTGC ACGCCTCGGC TTCAGCCAAA
GTGGTCAACA TCGCCACCAA TCTCGCGGCG CTGGTGTTCT TCGTGCCATC GGGCAATGTG
CTGTACGCCA TTGCCTTGCC CATGGCTGCA TGCAACGTGC TTGGCGCGCT GACCGGGACC
TGGCTGGCCG TGCGCAAGGG CGCAGGCTTT GTGCGCGGGC TGTTCCTGGT CTTGCTGTGT
GTGCTGATCG CCAAGCTGTC CTGGGACTTG CTGATGGGCT GA
 
Protein sequence
MMDIAVLSLF AFAAGLIDAA VGGGGLIQIP ALFNVLPAAQ PAALLGSNKL ASVCGTAFAA 
RSFIRKVTLD WGLIVPAALS AFIMSFAGAA TVSLVPPSVM RPAVLVLIVL MAIYTFCKKD
FGTLHAPAKI GRKEQCLAVL IGGAIGFYDG LFGPGTGSFL IFLFIRFFAL DFLHASASAK
VVNIATNLAA LVFFVPSGNV LYAIALPMAA CNVLGALTGT WLAVRKGAGF VRGLFLVLLC
VLIAKLSWDL LMG