Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3223 |
Symbol | |
ID | 6112175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3558111 |
End bp | 3558872 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641623010 |
Product | hypothetical protein |
Protein accession | YP_001750082 |
Protein GI | 170722394 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000006749 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.26431 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGATA TCGCCGTACT CTCCCTGTTC GCTTTTGCCG CCGGCCTGAT CGATGCTGCG GTAGGAGGTG GTGGGCTCAT TCAGATTCCG GCGCTGTTCA ACGTATTGCC CGCGGCGCAA CCTGCGGCCT TGCTTGGCAG CAACAAACTG GCATCGGTGT GCGGCACCGC TTTCGCGGCG CGCTCGTTCA TTCGCAAGGT CACCCTGGAC TGGGGGTTGA TCGTGCCGGC GGCGCTCAGT GCGTTCATCA TGTCGTTCGC AGGGGCCGCC ACGGTGTCGC TGGTGCCGCC CAGCGTGATG CGCCCGGCAG TGCTGGTGCT GATCGTGCTG ATGGCGATCT ACACCTTTTG CAAGAAGGAT TTCGGCACCT TGCACGCGCC GGCGAAGATC GGCCGCAAGG AGCAATGCCT GGCGGTACTG ATCGGCGGCG CCATCGGTTT CTATGACGGC CTGTTCGGGC CAGGTACCGG CAGCTTCCTG ATCTTCCTGT TCATTCGCTT TTTCGCGTTG GACTTCCTGC ACGCCTCGGC TTCAGCCAAA GTGGTCAACA TCGCCACCAA TCTCGCGGCG CTGGTGTTCT TCGTGCCATC GGGCAATGTG CTGTACGCCA TTGCCTTGCC CATGGCTGCA TGCAACGTGC TTGGCGCGCT GACCGGGACC TGGCTGGCCG TGCGCAAGGG CGCAGGCTTT GTGCGCGGGC TGTTCCTGGT CTTGCTGTGT GTGCTGATCG CCAAGCTGTC CTGGGACTTG CTGATGGGCT GA
|
Protein sequence | MMDIAVLSLF AFAAGLIDAA VGGGGLIQIP ALFNVLPAAQ PAALLGSNKL ASVCGTAFAA RSFIRKVTLD WGLIVPAALS AFIMSFAGAA TVSLVPPSVM RPAVLVLIVL MAIYTFCKKD FGTLHAPAKI GRKEQCLAVL IGGAIGFYDG LFGPGTGSFL IFLFIRFFAL DFLHASASAK VVNIATNLAA LVFFVPSGNV LYAIALPMAA CNVLGALTGT WLAVRKGAGF VRGLFLVLLC VLIAKLSWDL LMG
|
| |