| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3006 |
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| Symbol | |
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| ID | 6111957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3348173 |
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| End bp | 3349114 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641622793 |
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| Product | nickel transporter permease NikB |
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| Protein accession | YP_001749867 |
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| Protein GI | 170722179 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0438476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.3014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGCT ACATCCTGTT GCGCCTGGCG CTGCTTGTAC CGGTCATGCT TGGCGTTTCG
TTGCTGGTGT TCGTGCTGCT GCACCTGGGC AGCACCGACC CGGCGCTGGA CTACCTCAGG
CTTTCGCATA TCCCGCCGAC CGACGCAGCC ATCGCCGAGG TGCGCCATAC CCTGGGGCTG
GATCGCCCGC TGTATGCGCA ATACCTGAGC TGGCTGTGGA ACGCCGTGCA TCTGGACTTC
GGCATCTCCT ATATCACCGG CCGCCCAGTG CTTGATGACC TGCTCTACTA CCTGCCCGCC
ACCCTGCAAC TCGGCGGCCT GGCGTTGGCC TGCACGCTGC TGCTGTCGAT CCCCCTGGGG
CTGTTGGCGG CCCGCTGGCA AGGGCGCTGG CCCGACCACG CCGTGCGGGC AGTGACGTTC
CTGGGGGTGT CCATGCCCAA TTTCTGGCTG GCGTTTCTGC TGATCGCGCT GTTTTCCCTG
TGGCTGGGCT GGCTGCCGCC GCTGGGGCGT GGGGGGGCCG GGCATCTGGT GATGCCGGTG
CTGGCCATCG CCCTGATGTC GATGTCGATC AACGCCCGCC TGCTGCGTGC CAGCCTGCTG
GAAGCCGGCG GGCAGCGCCA CGTCATCTAT GCCCGTGCCC GCGGCCTGCC CGAACGGCAC
GTCTGGCGCG ACCATATCCT GCGCAATGCC TGGTTGCCGC TGGTGACCGC CACCGGCATG
CACATCGGCG AACTGATCGG TGGCGCACTG GTGATCGAGA CCATCTTCGC CTGGCCCGGC
GTTGGCCGTT TTGCGGTGTC AGCAGTGCTG AACCGCGACT TCCCGGTGAT GCAGTGCTTC
ACCTTGCTAC TGACCGGCCT GCTGATGGTC TGCAACCTGA TCGTCGATGT CTGCTACGCC
TGGCTTGATC CTCGCAGCCG GCTGGAAGGG GTGAACGCAT GA
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| Protein sequence | MLRYILLRLA LLVPVMLGVS LLVFVLLHLG STDPALDYLR LSHIPPTDAA IAEVRHTLGL
DRPLYAQYLS WLWNAVHLDF GISYITGRPV LDDLLYYLPA TLQLGGLALA CTLLLSIPLG
LLAARWQGRW PDHAVRAVTF LGVSMPNFWL AFLLIALFSL WLGWLPPLGR GGAGHLVMPV
LAIALMSMSI NARLLRASLL EAGGQRHVIY ARARGLPERH VWRDHILRNA WLPLVTATGM
HIGELIGGAL VIETIFAWPG VGRFAVSAVL NRDFPVMQCF TLLLTGLLMV CNLIVDVCYA
WLDPRSRLEG VNA
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