| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2989 |
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| Symbol | potE |
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| ID | 6111940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3327679 |
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| End bp | 3329010 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641622776 |
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| Product | putrescine transporter |
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| Protein accession | YP_001749850 |
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| Protein GI | 170722162 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00443871 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0573626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGATC CAGCAAAGAA AATGGGGTTG GTCGGGTTGA CCACTTTGGT CACCGTCAAC
ATGATGGGCT CCGGTATCAT CATGCTGCCC GCCAGCATGG CGCAGATCGG AGCTGTGTCG
CTGCTCTCGT GGGTTGTGAC GGCCGTGGGT TCGATGGCCA TCGCCTACTG TTTCGCGCAA
TGCGGTATCT ACTGCACGCG CTCGGGCGGA ATGTCGGCCT ACAGCGAAGA GGCCCATGGC
AAGTCCGCAT TCTTCCTTTG CTCCTACCTG TATTTCCTCT CGCTGATGAT CGGCAATGTC
GCCATTGGTA TTTCCGCGGT GGGTTATCTG ACGCCTTTCC TACCCTGGCT TGGTACAGGC
CCAGGCCCTC TGGTGGCAGG GACGGTGATG CTGATCTGGT TCAGTACCCT GGCCAATGCC
GGCGGTGCGA ACATAACCGG CAAACTAGGC GCGATCAGTG TCTGGGGCGT CATCATTCCT
GTGGCAGGCC TGAGTTTCGT GGGTTGGTAC TGGTTCAACC CACAGACGTT TACCGATGCC
TGGAACCCCG ACAGCATCCC GGTGAGCCAG GCGATCACCG CCAGTATCCC CCTGACGTTG
TGGGCCTTTC TGGGCATGGA GTCGGCCGCG CAAAATTCGG ATGCGGTAGA GAACCCCAAG
CGCAATGTGC CGCTTGCATG CCTGTTCGGC ACGCTAGGCG CGGCGGTGAT CTACATCCTG
TCGACCACCG TCATCCAGGG GATCGTGCCA AACCCTGAAC TTGCGAACTC CAGCGCACCC
TTCGCACTGG TCTATGCGCG CATGTTCAAT GACACGGTCG GTAACGTGAT CATGGGGTTG
GCGGTCATTG CCTGTGTCGG TTCATTGCTG GGGTGGCAGT TCACCCTGGC CGAAACGGCC
AAGGTTACCG CCGAGCAAGG GCTGTTTCCC ACGTTGTTCA CCCGCGTCAC CGCCAGGGGC
GCGCCACTGG CGGGCATGCT GACGTGCGCG GTCTTGCAGA GCCTGATTGC GTTATCGACC
ATTTCGCCTA ATGCCAGCGC TCAGTTCAGC AAGCTGGTCA ACCTGGCGGC AGTGACCAAC
ATCATTCCCT ACATCACGTC CCTGACCGGG TTGCTGGTGA TCATGTACAA GGCCCAGGTG
GATATAAAGA TCTTCCGTCG CAACAGCGCA ATCATGCTGG TTGCGGTGTG CTATTGCTTC
TATGCGCTCT ATGCCTCGGG TCTGGAAGCG GTGTTTGGCG CTGCGCTGAT CATGGCGCTG
GGTTACCTGC TGTTCGGCTT CATCGCCAAA CGTTTCGTCA AGGTGCTGGA CTTGATTGGA
GGTGCGCCAT GA
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| Protein sequence | MRDPAKKMGL VGLTTLVTVN MMGSGIIMLP ASMAQIGAVS LLSWVVTAVG SMAIAYCFAQ
CGIYCTRSGG MSAYSEEAHG KSAFFLCSYL YFLSLMIGNV AIGISAVGYL TPFLPWLGTG
PGPLVAGTVM LIWFSTLANA GGANITGKLG AISVWGVIIP VAGLSFVGWY WFNPQTFTDA
WNPDSIPVSQ AITASIPLTL WAFLGMESAA QNSDAVENPK RNVPLACLFG TLGAAVIYIL
STTVIQGIVP NPELANSSAP FALVYARMFN DTVGNVIMGL AVIACVGSLL GWQFTLAETA
KVTAEQGLFP TLFTRVTARG APLAGMLTCA VLQSLIALST ISPNASAQFS KLVNLAAVTN
IIPYITSLTG LLVIMYKAQV DIKIFRRNSA IMLVAVCYCF YALYASGLEA VFGAALIMAL
GYLLFGFIAK RFVKVLDLIG GAP
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