Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2960 |
Symbol | |
ID | 6111911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3288750 |
End bp | 3290069 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641622747 |
Product | PNDR family (class II) oxidoreductase |
Protein accession | YP_001749821 |
Protein GI | 170722133 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.184613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.426235 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTGA ACACTATTGA AATCGACACC CTCGTCGTCG GCGCCGGCCA GGCCGGCGTG GCCATGAGCG AACACTTGAG CAAGCTCGGC GTGCCGCACC TGGTGCTGGA GCGCAAGCGT ATCGCCGAGG CCTGGCGCAC TGGCCGCTGG GATTCGCTGG TCGCCAATGG CCCGGTCTGG CATGACCGCT TCCCCGGCCT TGAATTCAAC CTGGACCCCG ACGCCTTCGC CGGCAAGGAC CAGGTTGCTG ACTACTTCGA GCAATACGTG CGCAAGTACA ACCTGCCGGT GCGCACCGGC ATCGAGGTGA GGAAGGTGGT GCGCAATGCC GACCGCCCAG GCTTCACCAT CGAGACCAAT GAGGGGGTGA TTCGGGCCAA CCGCGTGGTG GCCGCCACCG GCCCGTTCCA GCGTCCGGTC ATCCCGGCCA TCGCGCCAAA GGATGAGCAC CTGCACCAGA TCCACTCTGC CGCCTATTTC AACCCCGGGC AGCTGCCTGA AGGCGCAGTG CTGGTGGTAG GTGCCGGCTC TTCCGGCGTG CAGATCGCCG AAGAGCTGAT GCGCGCCGGG CGCCAGGTGT ACCTGTCGGT CGGCGCCCAC GATCGTCCGC CACGGGCTTA TCGCAACCGC GACTTCTGCT GGTGGCTGGG CGTGCTGGGC GAATGGGATG CCGAGATCGC CAAGCCAGGC CGCGAGCACG TGACCATTGC CGTCAGCGGT GCCCGTGGCG GCCACACCGT AGACTTCCGC GCCCTCGCCC ATCAGGGCAT GACCCTGGTC GGCCTGACCC AGTCGTTCGA CAACGGTGTG GCACGCTTCC AGGACAACCT GGCCGACAAC ATCCGCCGTG GCGACGAAAA CTACCTGGCC CTGCTGGACG CTGCAGATGC CTATATCGAA CGCAACGGCC TGGACCTGCC GCAAGAGCCA GAAGCACGCA AGCGCCTGCC GGACCCGGCT TGCGTCAGCA ACCCGCTACT GGAATTGGAC CTGGCTAAGG CCAATGTCAC CAGCATCATC TGGGCCACCG GCTACGGCGT GGACTTCAGC TGGCTGCAGG TCGACACCTT CGATGCCAAC GGCAAACCCC AGCACCAGCG CGGCGTGTCC CGCGAGCCGG GTGTGTACTT CCTCGGCCTG CCCTGGCTGT CGCGCCGCGG TTCGTCGTTC ATCTGGGGCG TTTGGCACGA CGCCAAGCAC GTCGCCGGCC ACATCGCCAC CCAGCGCACT TACCTGGCCT ACCGCGACCG CGAACAGCGT GAAGCGGATG AGCAGCAACC TACCTCGATC AGCAACGTCA GCACCCTCGG AGCCCACTGA
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Protein sequence | MTLNTIEIDT LVVGAGQAGV AMSEHLSKLG VPHLVLERKR IAEAWRTGRW DSLVANGPVW HDRFPGLEFN LDPDAFAGKD QVADYFEQYV RKYNLPVRTG IEVRKVVRNA DRPGFTIETN EGVIRANRVV AATGPFQRPV IPAIAPKDEH LHQIHSAAYF NPGQLPEGAV LVVGAGSSGV QIAEELMRAG RQVYLSVGAH DRPPRAYRNR DFCWWLGVLG EWDAEIAKPG REHVTIAVSG ARGGHTVDFR ALAHQGMTLV GLTQSFDNGV ARFQDNLADN IRRGDENYLA LLDAADAYIE RNGLDLPQEP EARKRLPDPA CVSNPLLELD LAKANVTSII WATGYGVDFS WLQVDTFDAN GKPQHQRGVS REPGVYFLGL PWLSRRGSSF IWGVWHDAKH VAGHIATQRT YLAYRDREQR EADEQQPTSI SNVSTLGAH
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