Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2959 |
Symbol | |
ID | 6111910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3287770 |
End bp | 3288447 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641622746 |
Product | hypothetical protein |
Protein accession | YP_001749820 |
Protein GI | 170722132 |
COG category | [S] Function unknown |
COG ID | [COG3342] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00977193 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.494101 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTCT CCATCATCGG ACGCTGCCAG GAAACCGGCC AGGTCGGTAT CGCCATCAGT TCGTCGAGCA TCGCAGTAGG GGCGCGCTGC CCTTGGGTAC GTGCAGGCGT CGGCGCCGTT GCCACCCAGA ACATTACCTT GCCGGCCCTC GGCCCACAGA TTCTCGATGC CCTGGAACAG GGCCAGCTGC CGCCTGCTGC AGCGCTGGAC CGGGTGCTCA GCGCCAATGG CTGGAGCGAG TACCGCCAGG TAACGGTGAT CGACAGTAAC GGCCAGGTGG CGCTGTTCAC CGGCAAACAG GCGTTGGGTG TGCACAACGC CGTGGCCGGT GAGCAATGCG CGGCGGCCGG TAACCTGTTG TCTTCGGTAC AGGTCATCGA AGCCATGGTG CAAGCCTTCG AACAGGCCGG CGGGCACCTG GCTGATCGCC TGCTGGCGGC CATGCATGCG GCTATGGCTG CAGGCGGCGA GGCAGGCCCG GTGCACTCGG CGGCGCTGAA GATCGCGGGC GAGCTGACCT GGCCACTGGT GGACCTGCGC GTGGACTGGG CCGATGAAAA CCCGATCGGT GTGCTCGATG GTTTGTGGCA GGCGTACCGC CCGCAGATGC AGGATTACGT CACCCGCGCG CTGAACCCGA CGACTGCACC GAGCTATGGG GTGCCGGGTG ATGAGTGA
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Protein sequence | MTFSIIGRCQ ETGQVGIAIS SSSIAVGARC PWVRAGVGAV ATQNITLPAL GPQILDALEQ GQLPPAAALD RVLSANGWSE YRQVTVIDSN GQVALFTGKQ ALGVHNAVAG EQCAAAGNLL SSVQVIEAMV QAFEQAGGHL ADRLLAAMHA AMAAGGEAGP VHSAALKIAG ELTWPLVDLR VDWADENPIG VLDGLWQAYR PQMQDYVTRA LNPTTAPSYG VPGDE
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