| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2953 |
|---|
| Symbol | |
|---|
| ID | 6111904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 3278330 |
|---|
| End bp | 3280561 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641622740 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001749814 |
|---|
| Protein GI | 170722126 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.143577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.387035 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTT GGCAACGCCG TGCGCTGTTG GCCGCCGGTT TCTCCCTCAC TGTGACGAGC
GCGGCCTGGG CCGCACTGTC GGAGGTCGAT CCGGGCCCCT ACACCTTTGC CACCGGTGGT
TACCCGATGT GGTACAAGGA CACCGACAAC CTTTCCCTGG AGCTGTGCCA GTCGCGCGCT
ACCAGCACCC GTTTCCCTGG TGCACCGGGC GCACCGGCTT ACATGTGCAC CCTGCTGCCT
GAACCGGGTG TCTACGACGA CGCGCTGCCA CTGGTATTCC CCGACAACTG GCCCCCAGAA
ATGTTCTGGT TCCTGGCTGA AACCTCAATC CCGCAGGTGG GCAACAGTGG TTATGAACTG
GAAGTCTACG TAGCAGGCAT AGAAGCCGCT TTCGCCGCGG AAAACCCGGT AGACGGTGAC
CAGCAAAGCT TTGCCCGCAT CCGCATCCGC GCCTCGGTAC CGACGACCGG CACCTATGTC
ATCACCCACC CTTACGGTGT AGAGACGGTC AACGTGACCG CGGCCGGTCG GCGGGCGATC
AACATCACCC GCGACATCGG CATCGGCGCC CCGGGCGACT TCAGCGGAGC GCTCAACGGC
AACCTCGGGC CGTGGCTGCG CGGGGTCGGT GGCCCCTATA CCGAAGTCAA CCCGGATACC
GGTGCCAGCG AAACCTTCAT CGGCGACCCG AACCTCACCG AAGCGGTGAC CGGTAGCCCG
TTCAATACCA ACTTCGTACG CATCGAAGGG CCAGCCGGGG CCATCCAGAC CAATGTGTTC
ACGGTGTCGG GCAAGGTGCT TGACCAGCGT GCGCAAACGC CGGTAACCCT GGAGCGCGCC
ACCTACTCGC GCAACGGCGC CGGCACCCGC GTCGAAGTCT TCGCCAAAGC GCCGAACGAT
GCTGATGTAT GCATGCGCAA TGGCCTGGCC TTGGTCGGAA CTCCACCCTC GCCCTGCCAG
TTCAGCCTGC TTGCGGATAA CAACGGGCTG TTCTTCACCC AGCAGTTGAG CCAGACCGCG
CCGCCCCCGG TAGTGGTGGT AACCGGAAGC ACGGCTACCG GCGGCACACG CCCTACCTCA
CTTTCGAGCA AGCTGACAGA CGTGGTGAAA GTGGACACTG CCCGCTACGA CTGGGCCAAC
AAGCGCCTGG TGATCGAAGC ACGCTCCAGC GACGAGGTGG TAGTCCCCGA CCTGGTTGCC
CAAGGCTACG GCCGCCTGTC CAAATCCGGC CCCCTGCAGA GCCTGACCGT CAACGACCTC
AGCCAGCCGC CCGCGACTGT CACCATCAAA TCCGCCCATG GCGGCAGCGA TGTGGAACCG
GTGATCGTGG TCGGCAACGC GCCAATCGAA GCCGAAAACC AGGCGCCGCT GGCCCAGGCC
GATTCCGGCA GTACCAGCGT CGGTGTGCCG CTGACCCTCA ACCTGTTGCA GAACGACAGC
GATCCGGACG GTGACGTACC GCTGACCATC AGCGACCTGA CCCAACCGGG TACCGGCCTT
GGCGGTGTTG TGCTCAACGG CACCACGTCG GTCACCTACA CCCCGCCCGC CGACGCCACA
CAACCCCTGG TCGCCACCTT CAGCTATCAG GCGGTGGACG CCAAGGGCCT GAAGTCCACA
CCGGCCACCG TGACAGTGAA CGTTGCGCCA AACCAGCCGC CAACCGTGGC TGCCCAGACC
GTCGCGACAC TGGGCGTGCC CCTGAGCATC AACGTACTGG CAGGCGCCGC CGACCCGGAA
GGCAACGCAC CATTGGTAGT CGACAACGTC ACGCAACCCG CTGCCGGCCG CGGTGCAGTC
AGCACCGACG GCAGCACGGT GACCTACACG CCACCGGCGA CGGTCACCAC GGCGTTCACC
ACCACCTTCA CCTTCCAGGT GCGTGACTCG CTCGGTGCGC TGTCCAACCC CGGCACCGTC
ACCGTCAACG TGTCGCCACG CCCGGCCGCA GAAACCTTCG CGGTCACCGC GGCAACGGTC
ACGGCGCGCT CCAATAACCG TTTCAACTGG GACATCAGCG GCACCTCGTC GGTCACCACC
GGCAACACGG TGACCGTGCG CGTGACCACC ACCACGGGTG AGCAGGTCCT CGGCACCGTC
GCGGTACCGA TAACCGGTCG CTGGCGCCTG GCAGTGGGCA ACAGCACCAC GATGATCCCG
ACTGCCGCTC CTACGGCAAC CGTAACCAGC AGCCAAGGCA CCACACGCAC CGTCAACGTC
ATTGTGCGCT AA
|
|---|
| Protein sequence | MNTWQRRALL AAGFSLTVTS AAWAALSEVD PGPYTFATGG YPMWYKDTDN LSLELCQSRA
TSTRFPGAPG APAYMCTLLP EPGVYDDALP LVFPDNWPPE MFWFLAETSI PQVGNSGYEL
EVYVAGIEAA FAAENPVDGD QQSFARIRIR ASVPTTGTYV ITHPYGVETV NVTAAGRRAI
NITRDIGIGA PGDFSGALNG NLGPWLRGVG GPYTEVNPDT GASETFIGDP NLTEAVTGSP
FNTNFVRIEG PAGAIQTNVF TVSGKVLDQR AQTPVTLERA TYSRNGAGTR VEVFAKAPND
ADVCMRNGLA LVGTPPSPCQ FSLLADNNGL FFTQQLSQTA PPPVVVVTGS TATGGTRPTS
LSSKLTDVVK VDTARYDWAN KRLVIEARSS DEVVVPDLVA QGYGRLSKSG PLQSLTVNDL
SQPPATVTIK SAHGGSDVEP VIVVGNAPIE AENQAPLAQA DSGSTSVGVP LTLNLLQNDS
DPDGDVPLTI SDLTQPGTGL GGVVLNGTTS VTYTPPADAT QPLVATFSYQ AVDAKGLKST
PATVTVNVAP NQPPTVAAQT VATLGVPLSI NVLAGAADPE GNAPLVVDNV TQPAAGRGAV
STDGSTVTYT PPATVTTAFT TTFTFQVRDS LGALSNPGTV TVNVSPRPAA ETFAVTAATV
TARSNNRFNW DISGTSSVTT GNTVTVRVTT TTGEQVLGTV AVPITGRWRL AVGNSTTMIP
TAAPTATVTS SQGTTRTVNV IVR
|
|---|
| |